Transcript Information: R_Transcript_140623.p1


Annotated TAIR IDAT5G22800.1
Annotated Gene NameAlanyl-tRNA synthetase, class IIc
Annotated Gene Symbol(s)EMB86, EMB1030, EMB263
Annotation TypeOrtholog
Chromosome Positionchr5:7616221-7619961 | Reverse length=978
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4232635442417
Replicate 21.8463004456049
Replicate 33.5601473564572
Condition 2: 8 Hour
Replicate 13.3549140111767
Replicate 24.2298191621875
Replicate 34.2687836837311
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 22.5708583982881
Replicate 32.7079880031846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140623.p1 GENE.R_Transcript_140623~~R_Transcript_140623.p1 ORF type:complete len:978 (+),score=215.22,tRNA-synt_2c|PF01411.15|2.2e-196,tRNA_SAD|PF07973.10|2.7e-17,DHHA1|PF02272.15|3.2e-09 R_Transcript_140623:118-3051(+)
ATGGCTTGTGTCGCCTGGCCGATTCTGGCACGTCTATCGCCCCCCACTTCCGAAACGTTGTTTCGTCAAGCATATTATGGGACATGTATCTTTTCTGGGCATAATATCCGTACGTTTCGGAAACAACAACAACAACGTTTCAGGTACGCGAAACGCGATCTTTCCGTTTCAGCATTTGCACAGTCTGACGTTGTACAGAAAAAGAGGGCTGTTGATGATGAAGATAATGAACTCACAAGTGGGAATTCGATAAGAAGAAGATTTCTGGAATTTTACGAAAGCAGAGGTCATAAAGTGCTCCCAAGTTCATCACTTGTGCCTGAGGATCCTACTGTTCTTTTGACTATTGCTGGAATGCTTCAGTTCAAGCCTATCTTTTTAGGCCAGGTTCCAAGACTAGTACCTCGGGCTACCACTTCTCAGAAGTGTATACGCACTAATGATGTGGAGAATGTTGGCCGAACAGCTCGACATCATACATTCTTCGAAATGTTGGGCAATTTCAGCTTTGGAGATTACTTCAAGAAAGAGGCAATTGCGTGGGCATGGGAGATTTCTACGAAGGAGTTTGCAGTGCCAGCAGAGAGATTATGGGTTAGTATTTATGAAGATGATGATGAAGCTTTCTTGATATGGCGGGATGAGGTTGGTGTTCCTGAAGAGCGCATAAAGAGAATGGGTGAAGAAGATAACTTTTGGTCCAGTGGAGTGACTGGTCCCTGTGGTCCATGCTCTGAGATTTATTATGACTTTTACCCTGAGAGAGGTTGTTCAGATGTTGATTTGGGGGATGATGTGAGGTTTATCGAATTCTACAACCTGGTGTTCATGCAGTACAACAAAACAGAAGATGGATCCCTTGAGCCTCTAAAACAGAAGAACATCGATACTGGTCTTGGACTGGAGCGGATGGCTCGTATCCTTCAGCAGGTTCCAAATAATTATGAAACAGACCTTATTTATCCGATAATAGAGAAGGCTTCACAACTGGCAAATGTTTCCTATGCTGCTGCTGACGATTTTACAAAGACTAAACTTAAGATAATTGGAGATCATATGCGTGCCATTGTTTATCTCATATCAGATGGTGTAGTCCCTTCAAATATTGGAAGAGGTTATGTAGTACGCCGTCTTATTAGAAGGGCTGTTCGTACTGGGAGGTTACTTGGTATAGAAGGTGATGGTGAAGGGAATACAGAAAGTACCTTCTTACCTGCTATTGCACAGAAAGTAATAGAACTCAGTGCTGAAATAGATCCAGATGTGAGGAAAAAATCACTTTCCATTCTTGAGGAATTAAGGAGAGAAGAACTACGATTTGTGCAGACATTGGAGAGAGGAGAAAAGTTGCTTAATCAGATGTTAGATGATGCATCATCAAGTAGCCTTCAAAATGGATGTACACCTTGCTTATGTGGGAAAAATGCATTTCTTCTATATGATACTTATGGATTTCCAGTTGAGATAACCATAGAAGTGGCAGAAGAGCGTGGCATCCAGGTAGATATGGAGGGATTTGAGGTTGAGATGGAGAACCAAAGGAGGCAATCCCAGGCTGCTCATAATACAGTTAAACTCACAGTTGGAAATGGTGCTGATTTCACTGAAACTGTCCCTAACACCAAATTTCTGGGTTATGATACCCTTTCTTCAAGTGCAGTAGTGGAAGGGCTGCTGGTCAATGGAACCCCTATGATGCAGGTTAACGAAGGAAATGAAGTTGAGGTCTTGCTGGACACAACTCCATTTTATGCCGAATCTGGTGGCCAAATAGGAGATCATGGTTTTCTGTATGTTAAAGGTGCTGAAAGTCAGTTAAATGGTGTGGTGGAGGTGAAAGATGTCCAAAAAACTGGTAACATATTTGTTCACAAGGGAAGTATTACTGTTGGTGCTCTAGAAATTGGTCAGCAAGTGGAAGCTGCAGTTGATCCGATACTCAGGCAGAGGGCTAAGGTTCATCATACTGCTACGCATTTGCTACAATCTGCCCTGAAGAAAGTTATAGGGCAGGAGACATCACAAGCTGGTTCTTTGGTGGCTTTTGATCGTCTCAGGTTTGATTTCAACTTCCACCGTTCACTGTCAGAAAGCGAAATCCTTGAAATTGAAGAGCTCATCAATGGCTGGATTGGAGATGCAACCCTCCTTCAAACTAAAGTAATGGCTCTAGATGATGCAAAAAGAGCTGGGGCTATTGCAATGTTTGGAGAAAAATATGGGGAGCAGGTACGGGTGGTAGAAGTCCCAGGTGTTTCTATGGAACTTTGTGGTGGCACTCATGTGAGCAATACATCTGAAATACGTGGTTTCAGAATAGTCTCGGAGCAGGCTGTTGCGTCTGGCGTCCGACGTATTGAAGCAGTGGCTGGTGACGCATTCATTGAATACGTCACTACCAGGGACAATTACTTGAAGAATTTATGTTCCACCCTTAAGGTCAAAGCAGAAGAAGTAACACCAAGAATAGAAGCCTTGTTAGAGGAGCTGCGACAGGCAAGAAACGAAGTCTCAGCTGCCCGTGCAAGAGCTGCTGTATACAAAGCATCAACTGTCGTAAATAAAGCCTTTGATGTAGGGTCCTCAAAGAAGATTAGGGTAATAGTTGAGAACATGGATGATGTTGATGCTGATTCACTCAAGAGTGCAGCCGAGTTCTTGGTGAATAATCTACAAGATCCAGCAGCCGTAATTTTGGGATCGAGTCCAGGTGAAGGAAAGGTCAGTCTAGCTGCCGCATTTTCTCAAGGAGTTGTTGGTTTGGGCATTCAGGCTGGGAAATTCATTGGACCCATAGCGAAGTTGTGTGGTGGTGGCGGGGGTGGCAGGCCTAATTTTGCACAAGCAGGTGGAAGGAAGCCTGAGAATTTATCCGTTGCTCTTGATAAAGCACGAGATGAGATTGTTAAAATTATCTCTGATAAAGCAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140623.p1 GENE.R_Transcript_140623~~R_Transcript_140623.p1 ORF type:complete len:978 (+),score=215.22,tRNA-synt_2c|PF01411.15|2.2e-196,tRNA_SAD|PF07973.10|2.7e-17,DHHA1|PF02272.15|3.2e-09 R_Transcript_140623:118-3051(+)
MACVAWPILARLSPPTSETLFRQAYYGTCIFSGHNIRTFRKQQQQRFRYAKRDLSVSAFAQSDVVQKKRAVDDEDNELTSGNSIRRRFLEFYESRGHKVLPSSSLVPEDPTVLLTIAGMLQFKPIFLGQVPRLVPRATTSQKCIRTNDVENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWEISTKEFAVPAERLWVSIYEDDDEAFLIWRDEVGVPEERIKRMGEEDNFWSSGVTGPCGPCSEIYYDFYPERGCSDVDLGDDVRFIEFYNLVFMQYNKTEDGSLEPLKQKNIDTGLGLERMARILQQVPNNYETDLIYPIIEKASQLANVSYAAADDFTKTKLKIIGDHMRAIVYLISDGVVPSNIGRGYVVRRLIRRAVRTGRLLGIEGDGEGNTESTFLPAIAQKVIELSAEIDPDVRKKSLSILEELRREELRFVQTLERGEKLLNQMLDDASSSSLQNGCTPCLCGKNAFLLYDTYGFPVEITIEVAEERGIQVDMEGFEVEMENQRRQSQAAHNTVKLTVGNGADFTETVPNTKFLGYDTLSSSAVVEGLLVNGTPMMQVNEGNEVEVLLDTTPFYAESGGQIGDHGFLYVKGAESQLNGVVEVKDVQKTGNIFVHKGSITVGALEIGQQVEAAVDPILRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRFDFNFHRSLSESEILEIEELINGWIGDATLLQTKVMALDDAKRAGAIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTSEIRGFRIVSEQAVASGVRRIEAVAGDAFIEYVTTRDNYLKNLCSTLKVKAEEVTPRIEALLEELRQARNEVSAARARAAVYKASTVVNKAFDVGSSKKIRVIVENMDDVDADSLKSAAEFLVNNLQDPAAVILGSSPGEGKVSLAAAFSQGVVGLGIQAGKFIGPIAKLCGGGGGGRPNFAQAGGRKPENLSVALDKARDEIVKIISDKAS*

Click here to download the sequence:
Link to NCBI Protein BLAST