Transcript Information: R_Transcript_140645.p1


Annotated TAIR IDAT2G45350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR4
Annotation TypeOrtholog
Chromosome Positionchr2:18694816-18696657 | Reverse length=613
E-Value1.4E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6900889772888
Replicate 21.0692560397189
Replicate 31.3079464368173
Condition 2: 8 Hour
Replicate 11.6626204593809
Replicate 21.9324218875099
Replicate 32.2969630723329
Condition 3: 24 Hour
Replicate 11.806864457736
Replicate 21.5316152007345
Replicate 32.3981898653853


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140645.p1 GENE.R_Transcript_140645~~R_Transcript_140645.p1 ORF type:complete len:648 (-),score=108.01,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.0022,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.00048,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.0002,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+03,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|0.48,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|5e-08,PPR_2|PF13041.2|0.019,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.9e-06,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|65,PPR_1|PF12854.3|0.83,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|28 R_Transcript_140645:1496-3439(-)
ATGTTACTCACCACAAATCTAACACAACCATGGAGCTCAACCATACCCATTCTTTCTCACATTCAACACTGCAAAACCTTAAACGACATCAAACAAATCCATGGCCGCCTTATCACTACTGGCTTTATCCACAACACTTTTCTTACCACTAAAATTATCATCAACTTCTCTTCTTCCCAATACACACCCCTTATCCAATTTGCTCGCTTTCTCTTGCTATCCCAACACGCAACTATCCCATCTGATCAATCCCACTTTGACCCTTTTCTTTTTAATGCCGTCATTAAGTCCTTTGCTCTTGGTATTGGCAATAGTGACCCAAAACAAGCTCTTTTGATTCTCTGTTTCATGCTTCATAATGGTATTTGTGGTGATAAGTACTCCTTTTCTTTGGTTCTTAAAGCTTGTTCTCGACTTGGGTTGCTTGAAGAAGGTATGCAAATTCATGGGTTGCTGACTAAATTGGACCTTGGGTCGGAATTGTACTTGGAAAATGGTCTCATTTCTTTGTATGTGAGGTGTGGGTGTGTTGAGCTTGCCCGCCAAGTGTTCGATAGAATGCCGAACAGAGATTCTGTTTCTTATAATGCAATGATTGATGGCTATGTTAAATCCGGGTTTGTGAGTCTTGCTAGGGAATTGTTTGATCGAATGCCGGTTGAGGAGAGGAATTTGATATCTTGGAATTCGATGATTGGTGGGTATGTGCAATCAGAAGATGAGCTTGATAAAGCCTGGCAGTTGTTTGAGGAAATGCCGAAGAGAGATTTGGTTACGTGGAATTTGATGATCGATGGGCTTGCGAAGTGCAAGAAGATGGAAGTTGCTAGCCATTTGTTCGATCAAATGCCTAATAGGGATGTGATCACTTGGGCTACAATGATAGACGGATATGCAAAGATGGGTAATGTTGAAATTGCTAGAAATTTGTTTGATCAAGTCTCTGGGAAAGACATTGTGGTTTGTAATGCCATGATGGCTGGTTATGTTCAAAATGGGCGTTTTGTAGAAGCACTGGATTTCTTCGATGGTGTTTTTGAGGCGGGGAATTCATCGCCTGATAAGACTACCCTATCAATTGTTCTTTCGGCCATTGCTCAATTGGGGCGCATTGATGAGGGCATTGCGATGCATTCCTATATTCAGGCTAATAGAATCACCATCGATGGGAAACTTGGTGTGGCTCTTATAGACATGTATTCAAAATGCGGTAGCATTGATAAGGCTATTCGTGTTTTTGAAATTTTGAAAGGGAGGGATGTTGACCATTGGAATGCCATGATAGGAGGGCTAGCCATTCACGGTTTGGGTGAATTGGCTTTTGAGCTTTTCATGGAGATGGAGACGCTCTTTGTGAAGCCGGATGATATTACATTCATTGGGTTGCTAAATGCTTGTGGTCATGCAGGTCTAGTGAAAGAAGGGCAAATATGTTTCGAGCTGATGAGGAGAGTTCACAAATTGGAGCCAAAACTTCAGCACTATGGATGCATGGTTGACATCCTGGGAAAAGCTGGGCATCTAGAAGAAGCAAAAAAATTTATAGACGAGATGCCTATTGAGCCAAATGACATAATTTGGAGGACTTTACTTAGTGCTTGCATAAATCATGAAAACTTCTATCTTGGGCAACAGGTTGCTGAGCATCTTATTAGGTTTGATTATAGTTATCCAGGTTCTTATGTGCTTCTCTCCAATATGTATGCTACCTTTGGTGTGTGGAGTGATGTTAGTAGGATCAGGGCCATGATGGAGGACAAAGATGTGAAGAAACTTCCCGGTTGCAGTTCTATTGAACTCAATGGAGTTGTCCATGAATTCTTGGTCAGAGACAAAGCCCATCCTCATGCTGGAGAGGTCTATTCTCTATTGAACAACTTCCATGCTTCAGAGTTGAGCGCGATTCCAGATTCTGAATTTATAGAGCTGGAAGTGGTAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140645.p1 GENE.R_Transcript_140645~~R_Transcript_140645.p1 ORF type:complete len:648 (-),score=108.01,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.0022,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.00048,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.0002,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+03,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|0.48,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|5e-08,PPR_2|PF13041.2|0.019,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.9e-06,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|65,PPR_1|PF12854.3|0.83,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|28 R_Transcript_140645:1496-3439(-)
MLLTTNLTQPWSSTIPILSHIQHCKTLNDIKQIHGRLITTGFIHNTFLTTKIIINFSSSQYTPLIQFARFLLLSQHATIPSDQSHFDPFLFNAVIKSFALGIGNSDPKQALLILCFMLHNGICGDKYSFSLVLKACSRLGLLEEGMQIHGLLTKLDLGSELYLENGLISLYVRCGCVELARQVFDRMPNRDSVSYNAMIDGYVKSGFVSLARELFDRMPVEERNLISWNSMIGGYVQSEDELDKAWQLFEEMPKRDLVTWNLMIDGLAKCKKMEVASHLFDQMPNRDVITWATMIDGYAKMGNVEIARNLFDQVSGKDIVVCNAMMAGYVQNGRFVEALDFFDGVFEAGNSSPDKTTLSIVLSAIAQLGRIDEGIAMHSYIQANRITIDGKLGVALIDMYSKCGSIDKAIRVFEILKGRDVDHWNAMIGGLAIHGLGELAFELFMEMETLFVKPDDITFIGLLNACGHAGLVKEGQICFELMRRVHKLEPKLQHYGCMVDILGKAGHLEEAKKFIDEMPIEPNDIIWRTLLSACINHENFYLGQQVAEHLIRFDYSYPGSYVLLSNMYATFGVWSDVSRIRAMMEDKDVKKLPGCSSIELNGVVHEFLVRDKAHPHAGEVYSLLNNFHASELSAIPDSEFIELEVVS*

Click here to download the sequence:
Link to NCBI Protein BLAST