Transcript Information: R_Transcript_140647.p1


Annotated TAIR IDAT2G45350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR4
Annotation TypeHomolog
Chromosome Positionchr2:18694816-18696657 | Reverse length=613
E-Value2E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8958389397413
Replicate 20.40572561190914
Replicate 30.71929369263281
Condition 2: 8 Hour
Replicate 10.82802441850588
Replicate 20.97221225396459
Replicate 31.3153341029266
Condition 3: 24 Hour
Replicate 10.88725825034605
Replicate 20.47946214979516
Replicate 32.061885224128


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140647.p1 GENE.R_Transcript_140647~~R_Transcript_140647.p1 ORF type:3prime_partial len:414 (+),score=60.70,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.085,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|0.55,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0028,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00016,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.00012,PPR|PF01535.16|31,PPR|PF01535.16|0.0096,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|26,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|7.8e-06,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|3.5,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|0.00074,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|42,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|24 R_Transcript_140647:324-1562(+)
ATGGAGCCCAACCATACCCATTCTTCTCAAATTCAACACTGCAAAACCTTAAACGACATCAAACAAATCCATGGCCGCCTTATCACTACTGGCTTTATCCACAACACTTTTCTTACCACTAAAATTATCATCAACTTCTCTTCTTCCCAACACACACCCCTTATCCAATTTGCTCGCTTTCTCTTGCTATCACAACACGCAACTATCCCATCTGACCAATCCCACTTTGACCCTTTTCTTTTTAATGCCGTCATTAAGTCCTTTGCTCTTGGTATTGGCAATACTGACCCAAAACAAGCTCTTTTGATTCTCTGTTTCATGCTTCATAATGGTATTTGTGGTGATAAGTACTCCTTTTCTTTGGTTCTTAAAGCTTGTTCTCGACTTGGGTTGCTTAAAGAAGGTATTCAAGTTCATGGGTTGCTGACAAAATTGGATCTTGGGTCGGAATTGTACTTGCAAAATTGTCTCATTTCTTTGTATGTGAGGTGTAGGTGTGTTGAGCTTGCCCGCCAAGTGTTCGATAGAATGCCGAACAGAGATTCTGTTTCTTATAATGCTATGATTGATGGGTATATTAAATCCGGGTTTGTGAGTCTTGCTAGGGAATTGTTTGATCGAATGCCGGTTGAGGAGAGGAATTCGATTTCTTGGAATTCGATGATTGGTGGGTATGTGCAATCAGAAGATGAGCTTGATAAAGCCTGGAAGTTGTTTGAGGAAATGCCGAAGAGGGATTTGGTTACGTGGAATTTGATGATCGATGGGCTTGCGAAATGCAAGAAGATGGAAGTTGCTTGCCATTTGTTTGATCAAATGCCTAATAGGGATGTGATCACTTGGGCTACAATGATAGACGGATATGCAAAGATGGGTTATGTTGAAATTGCTCGAAATTTGTTTGATCAAGTCTCTGGGAAAGACATTGTGGTTTGTAATGCCATGATGGCTGGTTATGTTCAAAATGGGCGTTTTGTAGAAGCACTGGATTTCTTCGATGGTGTTTTTAAGGCGGGGAATTTATCGCCTGATAAGACTACCCTATCAATTGTTCTTTCGGCCATTGCTCAATTGGGGCGCAGTGATGAGGCCATCGTGATGCATTCCTATATTCAGGTTAATGAAATCACCATCGATGGGAAACTTGGTGTGGCTCTTATAGACATGTATTCAAAATGCGGTAGCATTGATAAGGCTATTTGTGTTTTTGAAAATTTGAAAGGGAGGAATGTTGACCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140647.p1 GENE.R_Transcript_140647~~R_Transcript_140647.p1 ORF type:3prime_partial len:414 (+),score=60.70,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.085,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|0.55,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0028,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00016,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.00012,PPR|PF01535.16|31,PPR|PF01535.16|0.0096,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|26,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|7.8e-06,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|3.5,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|0.00074,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|42,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|24 R_Transcript_140647:324-1562(+)
MEPNHTHSSQIQHCKTLNDIKQIHGRLITTGFIHNTFLTTKIIINFSSSQHTPLIQFARFLLLSQHATIPSDQSHFDPFLFNAVIKSFALGIGNTDPKQALLILCFMLHNGICGDKYSFSLVLKACSRLGLLKEGIQVHGLLTKLDLGSELYLQNCLISLYVRCRCVELARQVFDRMPNRDSVSYNAMIDGYIKSGFVSLARELFDRMPVEERNSISWNSMIGGYVQSEDELDKAWKLFEEMPKRDLVTWNLMIDGLAKCKKMEVACHLFDQMPNRDVITWATMIDGYAKMGYVEIARNLFDQVSGKDIVVCNAMMAGYVQNGRFVEALDFFDGVFKAGNLSPDKTTLSIVLSAIAQLGRSDEAIVMHSYIQVNEITIDGKLGVALIDMYSKCGSIDKAICVFENLKGRNVDH

Click here to download the sequence:
Link to NCBI Protein BLAST