Transcript Information: R_Transcript_140713.p1


Annotated TAIR IDAT4G30240.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14808359-14809745 | Reverse length=300
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.17522332621
Replicate 21.5230476985916
Replicate 32.7298184700078
Condition 2: 8 Hour
Replicate 10.82465348267924
Replicate 21.6799626253741
Replicate 31.5988465313294
Condition 3: 24 Hour
Replicate 12.200618827526
Replicate 21.3141734572106
Replicate 32.6083793150188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140713.p1 GENE.R_Transcript_140713~~R_Transcript_140713.p1 ORF type:complete len:386 (+),score=55.62,Syntaxin-6_N|PF09177.7|9e-19,Syntaxin-6_N|PF09177.7|1.2e+04 R_Transcript_140713:279-1436(+)
ATGAAGATGGCTACCAGCTTACACCAATGGGAATCAGACCCTTTTTTCTCTGCTGCAGAAGTGGTTCAAGACTCCGCTGACCGGATGGAATCAAATTTCCGTACGCTTTTGCATGAGCAAGCTCTTGTACAAGAGACTTCCCCATATGCAACTGTACATCCATCCATAGAGCACATTGTACGTGATTTGAAGACGACACTTGAAACAACCAAATGGCAGTTGGAAGATTTTGAAAGAGCAGTTAGTATAGCAGCTGTAAATGATAGTTCAGGCTTGAGGGCAGACATCATATCCAGGCATGAACAGTTTGTTAGAGCAATTAGGGAACAAATATTGGATGTTGAGATGTACTTTGGGAATCCCTTAGTGAGAAAAACAAATGGAGGTACAGATCGTTTCAACCTGAATGAACAAGAAAATGATAGTTTGGCTTTGTTCCTTTCTGGACGGAATAACGTAGAAATCATGCCACAGTCTGACTCGGAAGATAGTATATTGAAAAGGTTTCTTGATCCAACATCTCAAAGTGGTTTCAGTATCAGCTCTAATGAGTCAGTCGAACACGGTCCTGAAGAAACCAAGAATTCAAGTACTGACAGACTACTACCTGCAAGTCATGATTCTTCCTTGATACAAAATAATGGGCTGCGAAAGGTGGCGTCCTCATTACAACTAGGTCAAGAAGCACGAGCCTACGATAAAAGTTATCCTAATGGTTATCATCGAGAACTTGGAGGTTGGGATCTTGAGTCCAGCGAAGACAAATCCCGAAGTTCTAAGCAGAGGAAATTGAAGAGCGATCATAATAGAAGGAACAAGTTTTGTATCTCTCATTCCTTGTCATGTGCAAATGTAAACAGGATTTACAGGAGTTTGATGAAGAGGTGGAAGGATGAAGAAGAAAGACCCCATTCTGCATCATGCACTAGCATTTTCCACGGAGAACAGGACTGCCCTGGAGTAAGGTCATCCTCTTTGAGTGGCCCTTCCCGTGTGCCTCTTTGCGAAAGGTCAATTAGCTTCTGCCAATGGCTGTGCAGATCTTTCTACCAAAGGTCTCTGCGTTACACTCTAGCCAGTGGACGTTCTGTGCAAGTGTTATTGGTGATAATGTGCACCCTTTTTATTTTAGCTATCGTGGCATCCCAAGTGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140713.p1 GENE.R_Transcript_140713~~R_Transcript_140713.p1 ORF type:complete len:386 (+),score=55.62,Syntaxin-6_N|PF09177.7|9e-19,Syntaxin-6_N|PF09177.7|1.2e+04 R_Transcript_140713:279-1436(+)
MKMATSLHQWESDPFFSAAEVVQDSADRMESNFRTLLHEQALVQETSPYATVHPSIEHIVRDLKTTLETTKWQLEDFERAVSIAAVNDSSGLRADIISRHEQFVRAIREQILDVEMYFGNPLVRKTNGGTDRFNLNEQENDSLALFLSGRNNVEIMPQSDSEDSILKRFLDPTSQSGFSISSNESVEHGPEETKNSSTDRLLPASHDSSLIQNNGLRKVASSLQLGQEARAYDKSYPNGYHRELGGWDLESSEDKSRSSKQRKLKSDHNRRNKFCISHSLSCANVNRIYRSLMKRWKDEEERPHSASCTSIFHGEQDCPGVRSSSLSGPSRVPLCERSISFCQWLCRSFYQRSLRYTLASGRSVQVLLVIMCTLFILAIVASQVA*

Click here to download the sequence:
Link to NCBI Protein BLAST