Transcript Information: R_Transcript_140806.p1


Annotated TAIR IDAT1G04680.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1304052-1307780 | Reverse length=431
E-Value8.8E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4992785317837
Replicate 26.6732427679707
Replicate 36.9252927616275
Condition 2: 8 Hour
Replicate 16.2638259167371
Replicate 24.8535247407224
Replicate 35.2062759143746
Condition 3: 24 Hour
Replicate 17.4746349113455
Replicate 23.590390982187
Replicate 315.949180159445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140806.p1 GENE.R_Transcript_140806~~R_Transcript_140806.p1 ORF type:5prime_partial len:129 (+),score=17.92 R_Transcript_140806:3-389(+)
GCAGGCCTCATCCAGAGAATGCCAAGGTGTCGACATGGTTATTTCCACGTCGTGAACAATGACTACACCCACTGGGAAATGTATGCCATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGGAATAGATACCTTGCCCCTGCAAACCCTTTTGCAAAGGAGGTCACAAAGCGAGTAGACACAGGTGCAGGTCAGTGGAAGGGTTGGAATTGGAGGTCGGAGGGGGACCTTATGCTCAACGGTGCCTACTTCACCCCGTCTGGTGCTGGAGCCTCAGCCAGCTATGCTCGTGCCTCAAGCTTGGGTGCTAAGTCGTCTTCCATGGTTGGAGCAATTACTGCTAGTGCCGGTCCTCTATCCTGTCGCAGGGGCCGCCAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140806.p1 GENE.R_Transcript_140806~~R_Transcript_140806.p1 ORF type:5prime_partial len:129 (+),score=17.92 R_Transcript_140806:3-389(+)
AGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPANPFAKEVTKRVDTGAGQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMVGAITASAGPLSCRRGRQC*

Click here to download the sequence:
Link to NCBI Protein BLAST