Transcript Information: R_Transcript_140907.p1


Annotated TAIR IDAT1G12300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4184163-4186076 | Reverse length=637
E-Value1E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11956087961606
Replicate 20
Replicate 30.15004413272589
Condition 2: 8 Hour
Replicate 10
Replicate 20.1952915444645
Replicate 30.23779402559459
Condition 3: 24 Hour
Replicate 10.45113594988938
Replicate 20.096311174194661
Replicate 30.143369244674


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140907.p1 GENE.R_Transcript_140907~~R_Transcript_140907.p1 ORF type:3prime_partial len:458 (+),score=67.11,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|2.2e-08,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|2e-13,PPR_2|PF13041.2|6.4e-15,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|1.7e-17,PPR_2|PF13041.2|4.6e-14,PPR_2|PF13041.2|0.096,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|7.5e-13,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|2e-11,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|6.1e-15,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|0.0035,PPR|PF01535.16|52,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0027,PPR|PF01535.16|3.6e-10,PPR|PF01535.16|0.00027,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|1.6e-09,PPR|PF01535.16|6.2e-06,PPR|PF01535.16|0.26,PPR|PF01535.16|0.19,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|73,PPR_3|PF13812.2|2.6e-05,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|7.1e-05,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|9.5e+02,MRP-S27|PF10037.5|38,MRP-S27|PF10037.5|1.3,MRP-S27|PF10037.5|5.3,MRP-S27|PF10037.5|9.6e+02,MRP-S27|PF10037.5|0.73 R_Transcript_140907:81-1451(+)
ATGTGCTCCGCAACGGTTCGTCCCAACCCACCTATGGCTGCTATACATTCAGTTCTGTCATGTATTGTCAAAATGGGGCATTATTCCACCGTGCTTACCCTCTTTAAGATGATGGGTTTCTTGCAATTTTCCCCTGATTTATATTCCCTCAACATAGTAATCAATTGTTATTGCCACTTGGGTCGCGTTGAGTTGGGTTTCTCTGTTATGGGAAATATCATCAAGCTTGGTTTTGAGCCTAAAATTGTAACCTTCACCCCTTTGATACGCGGCCTTTGTGCAAACAACAAATATGTTGATGCAGTTGAGATATTCCACAAGGTTGGTGATCAGGGTTTGCCATTGGACCTGTTTACTTATAACACCTTAATTAATGGCCTTTGTAAATTAGGCCTTTTTGTTGAAGCCTTTGACGTACTTGAGGAGATGGAGTGTCATGGTTGTATGCCCGATGCTGTCACATTTAGTTCTATCATTGACAGTCTTATCAAGCGTAAGCTATTATCCGAGGCTATAAATCTTTTCTCGTTGATGATCAGCAAACGCATTACTCCTAATGTTGTCACTTACAATTGCTTCTTATGGGGACTTTGTAACGCTGGGCAATGGGATAGTGCCAACAGGCTACTTCAAGAAATGTTTGATGCCAATATTGCACCAGATAACCGCACTTTCAACACATTAGTTGCTATGTTCTGCAAAGAAGGGAGGCTCAGAGAAGCCGAGCGTGTTGTTGATTTGATGATTACATGGGGTCAAGACCCCAATACTGTCACTTATAATGTCCTTATTGGTGGATATTGCAAGCAAGGTCTAATAAACAAAGCATTGCAAGTTTTTGATGTTTTGGCTGCCAAGGGTTGTGCACCTGATGTTGTATCCTACACTTCATTGCTCAGTGGCCTTTTTGTTCAAAAAAGGACGGATGATGCAATGTTGCTCTTTAGAGAGATGTCACTCAAAGGAGTGACTCCAAATGTGCTCACATACAACACAGTCATAGATGGATTGTGCAAGGTTGGTAGAATTGAAGAAGCATGCAGTATTTTCGACGAGATGCAAATCAGGGGTGGAGTTGCTAACCTCATTACTTATGGTGCTCTACTAAGTGGCCTGTGCAAAAGCCATCATCTTGACAAGGCCTTCAAACTTTTTCACACTATGGAACATGAAGGATTAATTCCGAACATAAACATCTATGTGATCCTCATAGATGGATTTTGTGAGGCCAGCCAAGTTGACGTTGTTAGGAAGCTACTCTCTCTTCTTTTAGAGAAAAACATATGGGGTGATGCTCAGTGGTACAATGTCATCATCAATCGACTTTGCAAAGTAGGGATGCTGGCTGAAGCAAGTGACTTCATAAGGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140907.p1 GENE.R_Transcript_140907~~R_Transcript_140907.p1 ORF type:3prime_partial len:458 (+),score=67.11,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|2.2e-08,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|2e-13,PPR_2|PF13041.2|6.4e-15,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|1.7e-17,PPR_2|PF13041.2|4.6e-14,PPR_2|PF13041.2|0.096,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|7.5e-13,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|2e-11,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|6.1e-15,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|0.0035,PPR|PF01535.16|52,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0027,PPR|PF01535.16|3.6e-10,PPR|PF01535.16|0.00027,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|1.6e-09,PPR|PF01535.16|6.2e-06,PPR|PF01535.16|0.26,PPR|PF01535.16|0.19,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|73,PPR_3|PF13812.2|2.6e-05,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|7.1e-05,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|9.5e+02,MRP-S27|PF10037.5|38,MRP-S27|PF10037.5|1.3,MRP-S27|PF10037.5|5.3,MRP-S27|PF10037.5|9.6e+02,MRP-S27|PF10037.5|0.73 R_Transcript_140907:81-1451(+)
MCSATVRPNPPMAAIHSVLSCIVKMGHYSTVLTLFKMMGFLQFSPDLYSLNIVINCYCHLGRVELGFSVMGNIIKLGFEPKIVTFTPLIRGLCANNKYVDAVEIFHKVGDQGLPLDLFTYNTLINGLCKLGLFVEAFDVLEEMECHGCMPDAVTFSSIIDSLIKRKLLSEAINLFSLMISKRITPNVVTYNCFLWGLCNAGQWDSANRLLQEMFDANIAPDNRTFNTLVAMFCKEGRLREAERVVDLMITWGQDPNTVTYNVLIGGYCKQGLINKALQVFDVLAAKGCAPDVVSYTSLLSGLFVQKRTDDAMLLFREMSLKGVTPNVLTYNTVIDGLCKVGRIEEACSIFDEMQIRGGVANLITYGALLSGLCKSHHLDKAFKLFHTMEHEGLIPNINIYVILIDGFCEASQVDVVRKLLSLLLEKNIWGDAQWYNVIINRLCKVGMLAEASDFIRK

Click here to download the sequence:
Link to NCBI Protein BLAST