Transcript Information: R_Transcript_140912.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53843542639288
Replicate 20.30967994714304
Replicate 30.54057197867026
Condition 2: 8 Hour
Replicate 10.72229690109868
Replicate 20.52769042693063
Replicate 31.2850697784345
Condition 3: 24 Hour
Replicate 11.4898871947183
Replicate 20.65059760739166
Replicate 31.0330480088211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140912.p1 GENE.R_Transcript_140912~~R_Transcript_140912.p1 ORF type:complete len:339 (+),score=66.11,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|3.3e-11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|8.5e-09,PPR_1|PF12854.3|1.7e-14,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.00067,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.0026,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.17,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00065,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.00068,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1,MRP-S27|PF10037.5|12,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|4.3,MRP-S27|PF10037.5|85 R_Transcript_140912:896-1912(+)
ATGCTGGGCAATGGTATAATGCCAACTGGCTACTTCAAGAAATGTGTTGATGCCAATGTTTCACCAGATAACTGTACTTTCAACACATTAGTTGCTATGTTCTGCAAAGAAGGGAGGCTCAGAGAAGCCGAGCGTGTTGTTGATTTGATGATTACATGGGGTCAAGACCCCAATACTGTCACTTATAATGTCCTTATTGGTGGATATTGCAAGCAAGGTCTAATAAACAAAGCATTGCAAGTTTTTGATGTTTTGGCTGCCAAGGGTTGTGCACCTGATGTTGTATCCTACACTTCATTGCTCAGTGGCCTTTTTGTTCAAAAAAGGACGGATGATGCAATGTGGCTCTTTAGGGAGATGTCACTCAAAGGATTGACTCCAAATGCGTTCACATACAGCACAGTCATAGATGGATTGTGCAAGGTTGGTAGAATTGAAGAAGCATGCAGTATTTTCGACGAGATGCAAATCAGGGGTGGAGTTGCTAACCTCATTACTTATGGTGCTCTACTAAGTGGCCTGTGCAAAAGCCATCATCTTGACAAGGCCTTCAAACTTTTTCACACTATGGAACATGAAGGATTAATTCCGAACATAAACATCTATGTGATCCTCATAGATGGATTTTGTGAGGCCAGCCAAGTTGACGTTGTTAGGAAGCTACTCTCTCTTCTTTTAGAGAAAAACATATGGGGTGATGCTCAGTGGTACAATGTCATCATCAATCGACTTTGCAAAGTAGGGATGCTGGCTGAAGCAAGTGACTTCATAAGGAAAATTGAGAGCAGTGGCTGCTTTCCTAATCATTCCACTTACAATAGTCTGATCCAGGCATATCTTGGCAAACATGAGATATCTAAAGCTTTGGAATATATTCAGATGATGCATGATAATGGTTATTATATGTGTAAGCAGGTCATCAACTTAATTGCTGATATTTTGTCAAGCAAAACAGTTGATCCGCAACAGGAACTGATGTTGAAGAAGTTCGTCCTTATCAGTGAAAATTTGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140912.p1 GENE.R_Transcript_140912~~R_Transcript_140912.p1 ORF type:complete len:339 (+),score=66.11,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|3.3e-11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|8.5e-09,PPR_1|PF12854.3|1.7e-14,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.00067,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.0026,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.17,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00065,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.00068,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1,MRP-S27|PF10037.5|12,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|4.3,MRP-S27|PF10037.5|85 R_Transcript_140912:896-1912(+)
MLGNGIMPTGYFKKCVDANVSPDNCTFNTLVAMFCKEGRLREAERVVDLMITWGQDPNTVTYNVLIGGYCKQGLINKALQVFDVLAAKGCAPDVVSYTSLLSGLFVQKRTDDAMWLFREMSLKGLTPNAFTYSTVIDGLCKVGRIEEACSIFDEMQIRGGVANLITYGALLSGLCKSHHLDKAFKLFHTMEHEGLIPNINIYVILIDGFCEASQVDVVRKLLSLLLEKNIWGDAQWYNVIINRLCKVGMLAEASDFIRKIESSGCFPNHSTYNSLIQAYLGKHEISKALEYIQMMHDNGYYMCKQVINLIADILSSKTVDPQQELMLKKFVLISENLH*

Click here to download the sequence:
Link to NCBI Protein BLAST