Transcript Information: R_Transcript_140912.p2


Annotated TAIR IDAT1G62930.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23306534-23308423 | Forward length=629
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53949638289809
Replicate 20.20686010262363
Replicate 30.22568214380446
Condition 2: 8 Hour
Replicate 10.48248009748266
Replicate 20.66091276377888
Replicate 30.80475120977085
Condition 3: 24 Hour
Replicate 10.90474117153514
Replicate 20
Replicate 30.64692723212504


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140912.p2 GENE.R_Transcript_140912~~R_Transcript_140912.p2 ORF type:complete len:203 (+),score=9.98,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|1e-07,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|0.0031,PPR|PF01535.16|18,PPR|PF01535.16|0.18,PPR|PF01535.16|7.8 R_Transcript_140912:62-670(+)
ATGATGAATATGGTGGTGCATGTGCTCCGCAACGGTAACATTTCTCGCCTTTGCTTCGCATCTTCCTTCAATACTAACATAATTGCTACTTCTTTTCCCTTTCATTGTCGTTGTTTTGGTAATTTGAGACATGTAAACAAAACCCTAGTGCCAGAAAATCAAAATGGGTTCATGTTTAATAACGTTAATGATGCCGTTTCCCACCTTAATCACTTGCTTCAGGTTCGTCCCAACCCACCTATGGCTGCTATACATTCAGTTCTGTCATGTATTGTCAAAATGGGGCATTATTCCACCGTGCTTACCCTCTTTAAGATGATGGGTTTCTTGCAATTTTCCCCTGATTTATATTCCCTCAACATAGTAATCAATTGTTATTGCCACTTGGCTCGCGTTGATTTGGGTTTCTCTGTTATGGGAAACATCATCAAGCTTGGTTTTGAGCCTAAAATTGTAACCTTCACCCCTTTGATACGCGGCCTTTGTGCAAACAACAAATATGTTCCTTTCAAAAAAAAAAAAACAACAAATATGTTGATGCAGTTGAGATATTCCACAAGGTTGGTGATCAGGGTTTGCCATTGGACCTGTTTACTTATAACACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140912.p2 GENE.R_Transcript_140912~~R_Transcript_140912.p2 ORF type:complete len:203 (+),score=9.98,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|1e-07,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|0.0031,PPR|PF01535.16|18,PPR|PF01535.16|0.18,PPR|PF01535.16|7.8 R_Transcript_140912:62-670(+)
MMNMVVHVLRNGNISRLCFASSFNTNIIATSFPFHCRCFGNLRHVNKTLVPENQNGFMFNNVNDAVSHLNHLLQVRPNPPMAAIHSVLSCIVKMGHYSTVLTLFKMMGFLQFSPDLYSLNIVINCYCHLARVDLGFSVMGNIIKLGFEPKIVTFTPLIRGLCANNKYVPFKKKKTTNMLMQLRYSTRLVIRVCHWTCLLITP*

Click here to download the sequence:
Link to NCBI Protein BLAST