Transcript Information: R_Transcript_140914.p2


Annotated TAIR IDAT1G12300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4184163-4186076 | Reverse length=637
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1880625473486
Replicate 20.62119232000882
Replicate 31.0843426081019
Condition 2: 8 Hour
Replicate 10.14488677483577
Replicate 20.26462582060575
Replicate 30.75184186001603
Condition 3: 24 Hour
Replicate 11.3584501318168
Replicate 20.65252245238394
Replicate 31.1656174093614


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140914.p2 GENE.R_Transcript_140914~~R_Transcript_140914.p2 ORF type:complete len:169 (+),score=8.14,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|5.3e-13,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|9.7e-09,PPR|PF01535.16|13,PPR|PF01535.16|0.00095,PPR|PF01535.16|0.00067,PPR|PF01535.16|9.9e-06,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.5 R_Transcript_140914:81-587(+)
ATGTGCTCCGCAACGGTTCGTCCCAACCCACCTATGGCTGCTATACATTCAGTTCTGTCATGTATTGTCAAAATGGGGCATTATTCCACCGTGCTTACCCTCTTTAAGATGATGGGTTTCTTGCAATTTTCCCCTGATTTATATTCCCTCAACATAGTAATCAATTGTTATTGCCACTTGGGTCGCGTTGAGTTGGGTTTCTCTGTTATGGGAAATATCATCAAGCTTGGTTTTGAGCCTAAAATTGTAACCTTCACCCCTTTGATACGCGGCCTTTGTGCAAACAACAAATATGTTGATGCAGTTGAGATATTCCACAAGGTTGGTGATCAGGGTTTGCCATTGGACCTGTTTACTTATAACACCTTAATTAATGGCCTTTGTAAATTAGGCCTTTTTGTCGAAGCCTTGATGTACTCAAGGAGATGGACTGCATGCCCAATGTTGTCACATATAATATTATCATTGACAGTCTTATCAAGGGTAATCTATTATCTGAAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140914.p2 GENE.R_Transcript_140914~~R_Transcript_140914.p2 ORF type:complete len:169 (+),score=8.14,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|5.3e-13,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|9.7e-09,PPR|PF01535.16|13,PPR|PF01535.16|0.00095,PPR|PF01535.16|0.00067,PPR|PF01535.16|9.9e-06,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.5 R_Transcript_140914:81-587(+)
MCSATVRPNPPMAAIHSVLSCIVKMGHYSTVLTLFKMMGFLQFSPDLYSLNIVINCYCHLGRVELGFSVMGNIIKLGFEPKIVTFTPLIRGLCANNKYVDAVEIFHKVGDQGLPLDLFTYNTLINGLCKLGLFVEALMYSRRWTACPMLSHIILSLTVLSRVIYYLKL*

Click here to download the sequence:
Link to NCBI Protein BLAST