Transcript Information: R_Transcript_140985.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43287654438068
Replicate 20.82989329708688
Replicate 30.63378325364849
Condition 2: 8 Hour
Replicate 10.96782074890297
Replicate 20.70706345742879
Replicate 31.2914189374188
Condition 3: 24 Hour
Replicate 10
Replicate 20.26152480897918
Replicate 30.69210133397304


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140985.p1 GENE.R_Transcript_140985~~R_Transcript_140985.p1 ORF type:5prime_partial len:253 (+),score=48.13,Frigida|PF07899.7|8.5e-35,Frigida|PF07899.7|2.2e+03 R_Transcript_140985:3-761(+)
CAAATCCCATTTTTATGCAATGCATTGGAACTGGCAGAGAAGATTCCAGGTCTTATCCAATCTATTATTAGGAGAAATGAACATGTTCAGGCAGTCCGGTACATATGTACACTTAAGATGGAATATGCTTTCCCACCAGTCCCTCTTTTGAAAGCCTACTTGGATATCATCAGGAAGAGAGTGGAAGAGATATGCAGGAAAGGCAATGATAATGCTCAGGATGATGCTGCCAATGTGGAATTAACTGCTCTAAGAGATGTCCTTAAATGCATTATCGATTTCAAGCTCGAGTCCAACTATTCACCAGCACCCCTTGAATTGCGGATCAAGCAGTTAGAAAAGGAGATGAAAGACAGGAAGACTACAGCAAATTCCATTAAGAAGAATCCTGTTGAAAAAGTAAAGAAGTCGCATCAGAATATGAAAAGGACGGGAGAAATGCGTAATAATGTACAAGTAGAAGAGGTGGAAGTGAAGAAGACCAATTGCCAATCAAACTCCCAGGGTACAAAGAAACGCTTCCCTGCCCCTGCATTACCTCCACGACAACATAAGTTTCCGAGGTTAGGTTCTGGTCCAATTCTATTGCCCCATAATCCTACATACTTGCTGTATGGATATCCTGCTCAACTGCATGGATCTTTCACTACTTTTCCTGCGCCTCACTGGATCCATGCCCCTGCTGCTGGTTATGTTTATGGTTATCGAGCTTCCAATCGTACTGCTGGAACATACACAGTCAACCCCTACACCCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140985.p1 GENE.R_Transcript_140985~~R_Transcript_140985.p1 ORF type:5prime_partial len:253 (+),score=48.13,Frigida|PF07899.7|8.5e-35,Frigida|PF07899.7|2.2e+03 R_Transcript_140985:3-761(+)
QIPFLCNALELAEKIPGLIQSIIRRNEHVQAVRYICTLKMEYAFPPVPLLKAYLDIIRKRVEEICRKGNDNAQDDAANVELTALRDVLKCIIDFKLESNYSPAPLELRIKQLEKEMKDRKTTANSIKKNPVEKVKKSHQNMKRTGEMRNNVQVEEVEVKKTNCQSNSQGTKKRFPAPALPPRQHKFPRLGSGPILLPHNPTYLLYGYPAQLHGSFTTFPAPHWIHAPAAGYVYGYRASNRTAGTYTVNPYTR*

Click here to download the sequence:
Link to NCBI Protein BLAST