Transcript Information: R_Transcript_140988.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28632095615245
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.54018369947539
Replicate 20.086491211335597
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140988.p1 GENE.R_Transcript_140988~~R_Transcript_140988.p1 ORF type:5prime_partial len:255 (+),score=45.07,Frigida|PF07899.7|1.7e-34,Frigida|PF07899.7|1.9e+03 R_Transcript_140988:3-767(+)
CAAATCCCATTTTTATGCAATGCATTGGAACTGGCAGAGAAGATTCCAGGTCTTATCCAATCTATTATTAGGAGAAATGAACATGTTCAGGCAGTCCGGTACATATGTACACTTAAGATGGAATATGCTTTCCCACCAGTCCCTCTTTTGAAAGCCTACTTGGATATCATCAGGAAGAGAGTGGAAGAGATATGCAGGAAAGGCAATGATAATGCTCAGGATGATGCTGCCAATGTGGAATTAACTGCTCTAAGAGATGTCCTTAAATGCATTATCGATTTCAAGCTCGAGTCCAACTATTCACCAGCACCCCTTGAATTACGGATCAAGCAGTTAGAAAATGAGATGAAAGACAGGAAGACTGCAACAAAATCCATTAAGAAGAATCCTGTTGAAAAAGTAAAGAAGTCGCATCAGAATATGAAAAGGACGGGAGAAATGCGTAATAATGTACAAGTAGAAGAGGAGGTGGAAGTGAAGAAGACCAATTGCCAATCAAACTCCCAGGGTACAAAGAAACGCTGCCCTGCCCCTGTATTACTACCTCCACGACAACATAAGCTTCCGAGGTTAGGTTCTGGTCCAATTCTATTGCCCCATAATCCTACATACTTGCTGTATGGATATCCTGCTCAACTGCATGGATCTTTCACTACTTTTCCTGCGCCTCACTGGATCCATGCCCCTGGTTATGGTTATGGTTATGTTTATCGAGCTTCCAATCATACTGCTGGAACATACATAGTCAACACCTACACCCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140988.p1 GENE.R_Transcript_140988~~R_Transcript_140988.p1 ORF type:5prime_partial len:255 (+),score=45.07,Frigida|PF07899.7|1.7e-34,Frigida|PF07899.7|1.9e+03 R_Transcript_140988:3-767(+)
QIPFLCNALELAEKIPGLIQSIIRRNEHVQAVRYICTLKMEYAFPPVPLLKAYLDIIRKRVEEICRKGNDNAQDDAANVELTALRDVLKCIIDFKLESNYSPAPLELRIKQLENEMKDRKTATKSIKKNPVEKVKKSHQNMKRTGEMRNNVQVEEEVEVKKTNCQSNSQGTKKRCPAPVLLPPRQHKLPRLGSGPILLPHNPTYLLYGYPAQLHGSFTTFPAPHWIHAPGYGYGYVYRASNHTAGTYIVNTYTR*

Click here to download the sequence:
Link to NCBI Protein BLAST