Transcript Information: R_Transcript_141081.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value8.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1716722705036
Replicate 24.8991367638029
Replicate 33.8177895993587
Condition 2: 8 Hour
Replicate 11.4283421219226
Replicate 26.7082645523557
Replicate 39.8321224193763
Condition 3: 24 Hour
Replicate 11.1478903613852
Replicate 20.73517529635258
Replicate 31.6415778515173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141081.p1 GENE.R_Transcript_141081~~R_Transcript_141081.p1 ORF type:complete len:120 (-),score=23.81,XET_C|PF06955.8|4.7e+03,XET_C|PF06955.8|1.3e-19,Glyco_hydro_16|PF00722.17|2.2e-08 R_Transcript_141081:82-441(-)
ATGGAGGCAATTGGAGTTCCATTCCCAAAGAGCCAGCCAATGAGGATATACTCGAGTCTATGGAACGCCGATGACTGGGCAACACAAGGAGGAAGAGTAAAGACAGAGTGGTCTAAAGCTCCATTTACAGCTTCATACAGGAACTTCAATGCTAATGCTTGTGTTGTTTCCAATGGTAAATCAACCTGCGGCTCAAGCTCTGCATCTGGGAATAGTGATTGGTTGACAAAAGAGCTAGATAATGGCAGTCAAGCTAGGATGAAGTTGATTCAGAAGAACTACATGATTTACAATTACTGCACGGATGCTAAGAGATTCCCTCAAGGATTCCCTAAGGAGTGTACTGCCACAAGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141081.p1 GENE.R_Transcript_141081~~R_Transcript_141081.p1 ORF type:complete len:120 (-),score=23.81,XET_C|PF06955.8|4.7e+03,XET_C|PF06955.8|1.3e-19,Glyco_hydro_16|PF00722.17|2.2e-08 R_Transcript_141081:82-441(-)
MEAIGVPFPKSQPMRIYSSLWNADDWATQGGRVKTEWSKAPFTASYRNFNANACVVSNGKSTCGSSSASGNSDWLTKELDNGSQARMKLIQKNYMIYNYCTDAKRFPQGFPKECTATSS*

Click here to download the sequence:
Link to NCBI Protein BLAST