Transcript Information: R_Transcript_141086.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value3.2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8088519865037
Replicate 21.5132468768503
Replicate 31.6509360429659
Condition 2: 8 Hour
Replicate 10.22059337790311
Replicate 20.40289877191325
Replicate 31.4717522124638
Condition 3: 24 Hour
Replicate 10
Replicate 20.39739205208247
Replicate 30.19718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141086.p1 GENE.R_Transcript_141086~~R_Transcript_141086.p1 ORF type:complete len:111 (-),score=8.35,XET_C|PF06955.8|5.3e+03,XET_C|PF06955.8|1.1e-12,Glyco_hydro_16|PF00722.17|6.7e-09,Glyco_hydro_16|PF00722.17|1.4e+03 R_Transcript_141086:117-449(-)
ATGGAGACAATCGGAGTTCCATTCCCAAAGAATCAGCCAATGAAGATATACTCGAGTCTATGGAATGCGGATGACTGGGCAACACAAGGGGGAAGAGTGAAGACGGACTGGTCTAAAGCTCCATTTACAGCCTCGTACAGAAACTTCAATGCGAATGCTTGTGTTATGTCTAATGGCAAATCCTCTTGCAGCTCAAACTCAGCCTCAATGAATAATGCCTGGTTAACACAGCAACTTGATACCACTAGTCAATCAAGAATGAAACGCGTGCAAAAGACTTACATGATTTACAATTACTGCACAGACTCAAAGATTCCCTCAAGGCTTTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141086.p1 GENE.R_Transcript_141086~~R_Transcript_141086.p1 ORF type:complete len:111 (-),score=8.35,XET_C|PF06955.8|5.3e+03,XET_C|PF06955.8|1.1e-12,Glyco_hydro_16|PF00722.17|6.7e-09,Glyco_hydro_16|PF00722.17|1.4e+03 R_Transcript_141086:117-449(-)
METIGVPFPKNQPMKIYSSLWNADDWATQGGRVKTDWSKAPFTASYRNFNANACVMSNGKSSCSSNSASMNNAWLTQQLDTTSQSRMKRVQKTYMIYNYCTDSKIPSRLS*

Click here to download the sequence:
Link to NCBI Protein BLAST