Transcript Information: R_Transcript_141089.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value8E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4122341791313
Replicate 212.962933300497
Replicate 37.9675609030096
Condition 2: 8 Hour
Replicate 15.535934683725
Replicate 28.7499102856813
Replicate 38.8390451716667
Condition 3: 24 Hour
Replicate 13.5933959139015
Replicate 24.0274820582793
Replicate 34.1872130705369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141089.p1 GENE.R_Transcript_141089~~R_Transcript_141089.p1 ORF type:5prime_partial len:115 (+),score=4.57,XET_C|PF06955.8|5.6e+03,XET_C|PF06955.8|3.2e-21,Glyco_hydro_16|PF00722.17|2.2e-08,Glyco_hydro_16|PF00722.17|1.2e+03 R_Transcript_141089:1-345(+)
GTTCCATTCCCAAAGAATCAGCCAATGAGGATATACTCGAGTCTATGGAATGCGGATGACTGGGCAACACAAGGGGGAAGAGTGAAGACGGACTGGTCTAAAGCTCCATTTACAGCCTCATACAGAAACTTCAATGCTAACGCTTGTGTTATGTCTAACAGTAAATCGTCTTGCAGCTCAAACTCAGCCTCCATGAATAATGCCTGGTTAACGCAGCAACTTGATACCACTAGTCAAGCAAGAATGAAGCGCGTGCAAAAGACTTACATGATTTACAATTACTGCACAGACGCTCAAAGATTCCCTCAAGGCTTTCCTAAGGAGTGCACAGCCACCACTTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141089.p1 GENE.R_Transcript_141089~~R_Transcript_141089.p1 ORF type:5prime_partial len:115 (+),score=4.57,XET_C|PF06955.8|5.6e+03,XET_C|PF06955.8|3.2e-21,Glyco_hydro_16|PF00722.17|2.2e-08,Glyco_hydro_16|PF00722.17|1.2e+03 R_Transcript_141089:1-345(+)
VPFPKNQPMRIYSSLWNADDWATQGGRVKTDWSKAPFTASYRNFNANACVMSNSKSSCSSNSASMNNAWLTQQLDTTSQARMKRVQKTYMIYNYCTDAQRFPQGFPKECTATTS*

Click here to download the sequence:
Link to NCBI Protein BLAST