Transcript Information: R_Transcript_141142.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value1.5E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.736644871483
Replicate 24.1992600832596
Replicate 35.5630648447799
Condition 2: 8 Hour
Replicate 13.3230816714118
Replicate 23.9930146144974
Replicate 35.9641006324129
Condition 3: 24 Hour
Replicate 18.0352325296964
Replicate 26.6165776671732
Replicate 39.3804448658131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141142.p1 GENE.R_Transcript_141142~~R_Transcript_141142.p1 ORF type:3prime_partial len:140 (+),score=24.14,RNase_H2-Ydr279|PF09468.6|8.5e-21 R_Transcript_141142:381-797(+)
ATGGCGGCTTGGTGGGAAAGTGCTGATGGTCATATTCGAGTTCTTATTGCCCCAGACCAAGGCACTCTATCCGACAATACTGGAGAATTGCTTTCATTATGCCATCCCAAATCTGGAGTTACAACCAATTTTCTCTTCATCAATGAGGGTCTTCAAGAACTGAATTGGTTTAAACAATCTCATAGTTCATGGTTTCTGGGGGACTATATATGTGAAGATGGAAGCTTATATACATCAACACCAGTCGATCCTGTCTTTATTCTACTACCAATATTTCAGGATGCTCGGATGAAGAAGGGGGATGATCCAGGGAAGTTCAGGCAATTAGATGAGATTATCTATGTTGATGGCTATCCTGGATATCAACGTTTGCTCCATATTGCTGAGAAATCTATGAGTGTTGTTTGCGACATCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141142.p1 GENE.R_Transcript_141142~~R_Transcript_141142.p1 ORF type:3prime_partial len:140 (+),score=24.14,RNase_H2-Ydr279|PF09468.6|8.5e-21 R_Transcript_141142:381-797(+)
MAAWWESADGHIRVLIAPDQGTLSDNTGELLSLCHPKSGVTTNFLFINEGLQELNWFKQSHSSWFLGDYICEDGSLYTSTPVDPVFILLPIFQDARMKKGDDPGKFRQLDEIIYVDGYPGYQRLLHIAEKSMSVVCDIK

Click here to download the sequence:
Link to NCBI Protein BLAST