Transcript Information: R_Transcript_141231.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88117742540022
Replicate 20.72401035918269
Replicate 30.63191000265248
Condition 2: 8 Hour
Replicate 10.5066041023568
Replicate 20.15421297821507
Replicate 31.5022022582389
Condition 3: 24 Hour
Replicate 10.6333188200746
Replicate 20.60842093491248
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141231.p1 GENE.R_Transcript_141231~~R_Transcript_141231.p1 ORF type:5prime_partial len:145 (+),score=19.49,RVT_1|PF00078.23|1.9e-14 R_Transcript_141231:2-436(+)
GCTTCTAGGGAATGGTTTTCTTCCTCTCGGGGGTTGCGGCAGGGGGATCCTCTGTCCCCGTTCCTTTTTACCCTGGTGGTTGATGTCTTGAGTAGGATGTTGGAGAGAGCGGTGGACAAGGGAGTGGTTGCTGGTTTTTCGGTGGGGAGGGAGGCTATGATGGTTTCCCACTTGCAGTTTGCGGATGATACAATCCTGTTTCTGGATGATGACTTTGGGCATTTCAAGAACGTGCGGACTCTTCTCCAACTTTTTGAGGCTATTTCCGGGATGCGGGTTAACCTTGGAAAGTGTAGTGTCGCTGGGGTTAATATGAGTCACGAGGAGCTTGTGGGTTTTGTCAGATCTAGAGCTGGCCTTTGTCTTATTTGGGTATCCCACTTGGGGGTAATCCAAGGACGGTGTCTTTTTGGGAGCCTGTGGTTAGTCGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141231.p1 GENE.R_Transcript_141231~~R_Transcript_141231.p1 ORF type:5prime_partial len:145 (+),score=19.49,RVT_1|PF00078.23|1.9e-14 R_Transcript_141231:2-436(+)
ASREWFSSSRGLRQGDPLSPFLFTLVVDVLSRMLERAVDKGVVAGFSVGREAMMVSHLQFADDTILFLDDDFGHFKNVRTLLQLFEAISGMRVNLGKCSVAGVNMSHEELVGFVRSRAGLCLIWVSHLGVIQGRCLFGSLWLVA*

Click here to download the sequence:
Link to NCBI Protein BLAST