Transcript Information: R_Transcript_141370.p1


Annotated TAIR IDAT1G52530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19569045-19570004 | Forward length=319
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8941751934142
Replicate 22.7730962813979
Replicate 30.64830389423073
Condition 2: 8 Hour
Replicate 10.23099872591741
Replicate 21.0547585774144
Replicate 32.5686241443944
Condition 3: 24 Hour
Replicate 13.0321632187534
Replicate 21.8726163208981
Replicate 34.1297556013014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141370.p1 GENE.R_Transcript_141370~~R_Transcript_141370.p1 ORF type:5prime_partial len:106 (+),score=28.82 R_Transcript_141370:1-318(+)
GGTTTGAAGGTTTCTAGTAGTTTGATCACTTCTGGGGCTGAATTTAAGAGGCTGATGATTGTAGAAGAGGAAAGTAATAGTAGTAGTAGTAGTAGTAGTAGTGAAGGGGATAGTTTACCAAGTGTGCTTGTTAGTATGAAGCACTTTGTTAAGTGTTTGCAGTGTCATTTGGCAAAGCCTGATTGTGCTTTCTATGGAGTTGGGTCTCAAGCTGGATCTTTAACTGTGGTTTTTCAGTTCTTTGTTCCGGGTTCGAGGCAAATTGATAAGTCTGTTAGCTTTCATTGTAGGCTTCCTCTTATTGATCCTGGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141370.p1 GENE.R_Transcript_141370~~R_Transcript_141370.p1 ORF type:5prime_partial len:106 (+),score=28.82 R_Transcript_141370:1-318(+)
GLKVSSSLITSGAEFKRLMIVEEESNSSSSSSSSEGDSLPSVLVSMKHFVKCLQCHLAKPDCAFYGVGSQAGSLTVVFQFFVPGSRQIDKSVSFHCRLPLIDPGS*

Click here to download the sequence:
Link to NCBI Protein BLAST