Transcript Information: R_Transcript_141372.p1


Annotated TAIR IDAT1G52530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19569045-19570004 | Forward length=319
E-Value5.4E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6771009400254
Replicate 22.2396053777385
Replicate 31.8325390076922
Condition 2: 8 Hour
Replicate 12.4485864947245
Replicate 22.0124793657067
Replicate 33.0857738054658
Condition 3: 24 Hour
Replicate 13.0610409636939
Replicate 23.3818063632219
Replicate 34.3775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141372.p1 GENE.R_Transcript_141372~~R_Transcript_141372.p1 ORF type:complete len:300 (+),score=60.48,Hus1|PF04005.8|6.1e-55 R_Transcript_141372:166-1065(+)
ATGAAGTTCAAGGCATTCCTGACAGAAAATGGGGTAACCCTCTTAGAGAAAAGATTCATCCCAGCCCTTGAAAAAATGGGCAAAATCTGCCATGTCTATCTAACCAAGGACCATGCTTTTTTTCTCCACAACATCCTCACAAATGATGGTGTTCAATCCATAACCCAGTTCAAAAAAGAATCCCTATTCTCAGATTACAGAATCTCAAGCCAAAACGAAGACCGAATCGCCTTTTCGCTTGATCTTTCCCTCCTTCTAAGAGCCCTAAAATCAGCTTCAGCTATATCCACATCACTTGATCATAATCTCCAAATCAAGCTTGTGAAAAAACTACCCCCAAATACCACAAACCCAATGCCCTTTTTAACCTTTGAAACAAAAGGGTATGCTTCTGCTGTAATTCAAGACATACCCATCTCAAATCCCTTGTCAAGAATCCAAATTGTGGAGCTCCAAACCTCGCTCGACATTGCCCAAGACTTGCCTAGGACATTAGTGGGTTTAGGGGAGTTTGATAGGTTGTTGAATGTTGTTGAGAGGATGAAACATCTGGGGGATGTTATGGAGGTTGAGATCAATAAAATTGGTGAATTGGGTTTGAAGGTTTCCAGTAGTTTGGTCACTTCTGGGGCTGAGTTTAAGAGGCTGATGATTGTAGGAGAGGAAAGTAATAGTAGTAGTAGTGAAGGGGATAGTTTACCAAGTGTGCTTGTTAGTATGAAGCACTTTGTTAAGTGTTTGCAGTGTCATTTGGCAAAGCCTGATTGTGCTTTCTATGGAGTTGGGTCTCAAGCTGGATCTTTAACTGTGGTTTTTCAGTTCTTTGTTCCGGGTTCGAGGCAAATTGATAAGTCTGTTAGCTTTCATTGTAGGCTTCCTCTTATTGATCCTGGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141372.p1 GENE.R_Transcript_141372~~R_Transcript_141372.p1 ORF type:complete len:300 (+),score=60.48,Hus1|PF04005.8|6.1e-55 R_Transcript_141372:166-1065(+)
MKFKAFLTENGVTLLEKRFIPALEKMGKICHVYLTKDHAFFLHNILTNDGVQSITQFKKESLFSDYRISSQNEDRIAFSLDLSLLLRALKSASAISTSLDHNLQIKLVKKLPPNTTNPMPFLTFETKGYASAVIQDIPISNPLSRIQIVELQTSLDIAQDLPRTLVGLGEFDRLLNVVERMKHLGDVMEVEINKIGELGLKVSSSLVTSGAEFKRLMIVGEESNSSSSEGDSLPSVLVSMKHFVKCLQCHLAKPDCAFYGVGSQAGSLTVVFQFFVPGSRQIDKSVSFHCRLPLIDPGS*

Click here to download the sequence:
Link to NCBI Protein BLAST