Transcript Information: R_Transcript_141536.p1


Annotated TAIR IDAT1G05760.1
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)RTM1
Annotation TypeOrtholog
Chromosome Positionchr1:1723797-1724440 | Reverse length=174
E-Value5.1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.295282515264
Replicate 22.3888006461657
Replicate 31.3716609339013
Condition 2: 8 Hour
Replicate 12.3459511326702
Replicate 22.6779499211001
Replicate 32.8259992582638
Condition 3: 24 Hour
Replicate 12.1995503930735
Replicate 22.641348370129
Replicate 35.3736280967832


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141536.p1 GENE.R_Transcript_141536~~R_Transcript_141536.p1 ORF type:complete len:167 (+),score=18.19,Jacalin|PF01419.13|8.6e-11 R_Transcript_141536:388-888(+)
ATGCTAAAAGTTGGATCCTATGATCCGGAAGATCCCAGCATTATGACTTGGGACGGGAAGGGACTAGCAAACATTGCTCAGATTTTCATATGGCGTGGCTCATTTATAAATTCTCTTCAGTTCCAGTACGTTGACGATGATGGCAATTTGGTGCTTTCCACTATATTTGGCTGCCCCAACCCAAAATCTCTTAATTTTGATACGGTGACATTTACTGACTCCCCTAAGGAGTATATTACAAGAGTGACTGGTTCCAATGGTAGTCCTTATGACCGTGGTGTGAGAACATTGACAATTGAAACAAATGAAGCCACTTACGGGCCGTTTGGAAGCCAGCGACCAGGCGATGATCTTTTTAACTACTGGTTTGGACCCTTAAATCAGTTTGGTGGATTTCATGGCACCTCTTCCTCTGAACACCTTACTTCTATTGGTGTTTATGTCCAACCTATACAAGATCTTGGGGCATTTTCAAAGAAGACTGAACTCCTAATCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141536.p1 GENE.R_Transcript_141536~~R_Transcript_141536.p1 ORF type:complete len:167 (+),score=18.19,Jacalin|PF01419.13|8.6e-11 R_Transcript_141536:388-888(+)
MLKVGSYDPEDPSIMTWDGKGLANIAQIFIWRGSFINSLQFQYVDDDGNLVLSTIFGCPNPKSLNFDTVTFTDSPKEYITRVTGSNGSPYDRGVRTLTIETNEATYGPFGSQRPGDDLFNYWFGPLNQFGGFHGTSSSEHLTSIGVYVQPIQDLGAFSKKTELLIN*

Click here to download the sequence:
Link to NCBI Protein BLAST