Transcript Information: R_Transcript_141650.p1


Annotated TAIR IDAT5G46100.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18694316-18695734 | Reverse length=472
E-Value1E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.634593518333
Replicate 20.26860938698889
Replicate 30.97683315975064
Condition 2: 8 Hour
Replicate 10.73092134170881
Replicate 21.2873002339275
Replicate 31.2384894239923
Condition 3: 24 Hour
Replicate 11.3706153568779
Replicate 21.3637580124238
Replicate 32.1000995968238


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141650.p1 GENE.R_Transcript_141650~~R_Transcript_141650.p1 ORF type:complete len:469 (+),score=78.20,PPR_2|PF13041.2|73,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|8.3e-11,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|5.2e-20,PPR_2|PF13041.2|7e-18,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.3e-07,PPR_1|PF12854.3|8.5e-16,PPR_1|PF12854.3|3.9e-11,PPR_1|PF12854.3|6.1e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|1.4e+02,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.0019,PPR|PF01535.16|29,PPR|PF01535.16|0.12,PPR|PF01535.16|0.014,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|6e-08,PPR|PF01535.16|0.86,PPR|PF01535.16|8.2e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.0068,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.7,TPR_19|PF14559.2|0.82,TPR_19|PF14559.2|2.9e+03,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|64,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|8e+02 R_Transcript_141650:267-1673(+)
ATGGGCAGCAAAGTGGTGATCAAATGGTCCAAAAAAATCACCGCAAAACAAGTAGAACAGCTAATTAGAGCTGAAAAGGACTTACACAAAGCTACTGAAATATTTGAATCAGCAACAGCTGAGTACAAAAATGGGTTTAGGCATGACCAAACCACTTTTGGGCTTATGATTTCTAGATTAGTTTCTGCCAACCAGTTTAGATCAGCAGAAGAGCTCCTTCACAGAATGAAGGAAGAGCAATGTCGTATTAGTGAAGATGTTTTCCTTTCAGTTTGTAGGGCATATGGTCGCGTTCATAAGCCACTCGAGGCTGTTAGGGTTTTCGAGAGTGCTAAGGAGTTTGAGTGTGAGCTCACTGAGAAATCATATGTTACGCTCTTCTCCATTCTTGTTGATGAAAACCAGCTCAAGATGGCCTTTAGGTTTTATAGGTATATGAGGGAAATGGGTATTGCGCCAACTGTTGTTTCTCTCAACATTTTGATCAAGGCATTGTGTAAGAATAGTGGGACTGTTGATTCAGCTATTAATATATTTCATGAGATGCCAAATCGTGGGTGTCCTCCTGATTCATACACGTATGGTACTTTGATTAGCGGTTTGTGTAGATTTGGAAGGACGGATGAGGCGGTCAAGCTTTTTAGAGAGATGGAGACTAAAGGTTGTACAGCTAGTGTCGTAACTTATACTTCTTTGCTACATGGTCTATGCCAGTCTGAAAAGTTAGGTGAAGCTCTGAAGTTGTTTAAAGAGATGACGAGGAAGAGCATTAAACCGAATGTGTTTACCTATAGTTCATTGATGGATGGTCTTTGTAAACATGGGCGTTCTTCTGATGCCTTGGAACTACTTGAGGCGATGGTAAGCCAACGTCTTTCTCCAAACATGGTTACTTATAGTACTCTCATTCATGGACTTTGTAAAGATAGGGATCTTCCTCAAGCTTTGGAGCTTTTTGATAGGATGAAACTTCAAGGTCTAAAGCCTGATGCAGGATTGTATGGGAAGATCATAACTGGCTTATGTGACTTGAAAAAGTTTCAACAAGCTGCGAACTTCCTTGATGAAATGGTCCTCGCAGGAATCTCACCCAATAGATTGACATGGAGCATTCATGTTAGGACTCATAATACTGTGATATTAGGTCTTTGTGAGACTGATTTGAATCGTGCTTTTCATTCGTATCTAAGTATGAGAACCAGGGGCCTTTCAGTGGAGCCTGAGGTTTTTAGCTCACTTATTGAAGGCTTCTGCAAGAAAGAAGACTTCCACAAAGCTTGTTCCATTGTTGATGAGATGGTTTGTGACGGCTGCATTCCTAATGAGGACATGTGGAAGGGTATCTTGGGTGGTTTTTGTGATCAAAGAAAGATGTGGGATCTGCTAAACTGGTCCAGGTTCATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141650.p1 GENE.R_Transcript_141650~~R_Transcript_141650.p1 ORF type:complete len:469 (+),score=78.20,PPR_2|PF13041.2|73,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|8.3e-11,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|5.2e-20,PPR_2|PF13041.2|7e-18,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.3e-07,PPR_1|PF12854.3|8.5e-16,PPR_1|PF12854.3|3.9e-11,PPR_1|PF12854.3|6.1e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|1.4e+02,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.0019,PPR|PF01535.16|29,PPR|PF01535.16|0.12,PPR|PF01535.16|0.014,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|6e-08,PPR|PF01535.16|0.86,PPR|PF01535.16|8.2e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.0068,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.7,TPR_19|PF14559.2|0.82,TPR_19|PF14559.2|2.9e+03,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|64,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|8e+02 R_Transcript_141650:267-1673(+)
MGSKVVIKWSKKITAKQVEQLIRAEKDLHKATEIFESATAEYKNGFRHDQTTFGLMISRLVSANQFRSAEELLHRMKEEQCRISEDVFLSVCRAYGRVHKPLEAVRVFESAKEFECELTEKSYVTLFSILVDENQLKMAFRFYRYMREMGIAPTVVSLNILIKALCKNSGTVDSAINIFHEMPNRGCPPDSYTYGTLISGLCRFGRTDEAVKLFREMETKGCTASVVTYTSLLHGLCQSEKLGEALKLFKEMTRKSIKPNVFTYSSLMDGLCKHGRSSDALELLEAMVSQRLSPNMVTYSTLIHGLCKDRDLPQALELFDRMKLQGLKPDAGLYGKIITGLCDLKKFQQAANFLDEMVLAGISPNRLTWSIHVRTHNTVILGLCETDLNRAFHSYLSMRTRGLSVEPEVFSSLIEGFCKKEDFHKACSIVDEMVCDGCIPNEDMWKGILGGFCDQRKMWDLLNWSRFI*

Click here to download the sequence:
Link to NCBI Protein BLAST