Transcript Information: R_Transcript_141952.p1


Annotated TAIR IDAT4G28080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13948993-13957840 | Reverse length=1819
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4462731176427
Replicate 21.0341820365416
Replicate 31.3644333963344
Condition 2: 8 Hour
Replicate 10.86948661324697
Replicate 20.7684151835459
Replicate 30.93565003197871
Condition 3: 24 Hour
Replicate 11.4463681529481
Replicate 21.1116052590898
Replicate 31.3288068137521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_141952.p1 GENE.R_Transcript_141952~~R_Transcript_141952.p1 ORF type:complete len:873 (+),score=216.39,TPR_12|PF13424.2|1.1e-10,TPR_12|PF13424.2|8.7e-11,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|2.9e-07,TPR_10|PF13374.2|2 R_Transcript_141952:758-3376(+)
ATGAAGAGCTATGGGGATTTGGCTGTTTTCTACTATCGCCTTCAGCACACAGAACTGGCCTTAAAGTATGTCAATCGTGCACTATATCTTCTGCATCTAACATGCGGTCCTTCTCATCCAAACACTGCCGCCACATATATTAATGTGGCAATGATGGAAGAAGGTCTGGGGAATGTTCATGTCGCACTAAGATATCTGCACGAGGCTCTGAAGTGCAACCAGAGACTACTTGGAGCGGATCATATCCAGACTGCTGCAAGCTATCATGCCATCGCAATTGCTTTATCTTTGATGGAAGCTTACTCATTAAGTGTTCAGCACGAGCAGACCACCCTACAAATACTGCAGGCCAAACTTGGATCAGAAGACCTACGAACTCAGGATGCGGCTGCTTGGCTTGAATATTTTGAATCCAAGGCCCTAGAGCAGCAGGAAGCTGCACGTAATGGCACTCCAAAACCAGATGCCTCTATTTCCAGCAAAGGGCATTTAAGCGTATCCGATCTTCTGGACTATATAACTCCAGAAGCAGAACTAAGGGCAAGAGAAGCCCAAAGGAAACAAGCCCGAGCAAAGGTGAAGAACAAAACTGGCCAAACCGGGGAACAAGCTGCAGATCAATCCCCCAAAGATGAAACTTCACCATCTAGCTTTCCGGCTGAGAACAATAGTGACAAAGAAAACAAAACTGAACCTGATTTACCAGAGCCTGTAGATAAGACAAAAGTTAACCCAGCCGTCGAAATAGTTAGTACCCAAATTGCTGATCTGAACCAAGATGACACTTCTGATGAAGGATGGCAAGAAGCAGTTCCCAAAAGTCGTTCAAACATTGGCCGTAAGCCTTCTGCTTCACGGAGGCCAAGCCTTGCAAAACTGAACACAAATTTTGTGAATCAGCAATCCCGATATCGAGGAAAGGCTGGAAACTTTACATCCCCAAGAACTCCATCAAGTGATTCTGCTACTCCTAGTCCCTCCTCGGCCACAAAAAAATTTGGAAAGAGTCCAAGCTTTAGCCCGAAGCAGATCTGTAACACTACCGCCTCAGCTGCTCAAGCTGAAAAGTCAGCGAACCCCAAGCCTGTACCACAGAGCCCAGCTCCTGTTGAGCAAGTTGGTAAATCAGCTCCTCTTGCAAGTTCACTTAATGTCCAGACGGCAGGAAAGCTATTCTCCTATAAAGAAGTTGCTCTGGCCCCTCCTGGGACAATTGTGAAGGCAGTTGTCGAGCAATCAAAGGACAGTGGTTTGCCAGAACAAAACCCTGGATCAAACCAGGAAACCACTAATACTGGATCAACTCAGTCTGAAGGGAAATCGGCATTAGACAAAGCAGACGAAGAAAAAGCTCAGAAGCCTTTAAAGGATGAAGAAAAGAAGTCAACCACCAGTGTGGCAGAAACAAAATCAGAGGAAGATGTAGAAAAGGTACAACCGGCCAATCAAGTGGAAACCAGTACAAGCACAGATAAAGAGGGTGAAATCAAAGCAAATGTTGGAGGAGGAAACTCCGACACTGTGTTGTCCTCAGATTTAAAAGATGGAGAAGTTGCAGAAAGCAAAGAAAGTGAAAACACCCAAGTCCTGAAATCAGAGGGTTCTTCAAATGGCAGTCTCTCTGGAAATGAACTCTCGGAAACAGGTGGTTCAGATAAGTGCCCTGAGACTTCTCCATTGTCAGACTCAGAGCCTGTTTCAAATGGAAATGGAAACTTTGAGGGTATAGCAGGTAGTGATAGTGATGGGATGACTTCTCCAACAGAAGGGGAGAAACTGACTAAGAAACTTTCTGCATCTGCCCCTCCATTTAATCCATCAACTGTACCAGTGTTTGGATCTGTTCCGGTTCAAGGTTTTAAGGATCATGGTGGGATATTACCTGCACCTGTGAATATTGCACCTATGATATCAGTTAATCCTGTTCGTAGATCACCCCATCAATCGGCTACAGCCAGGGTTCCATATGGCCCTCGGCTTTCTGGTGGTTACAACAGGTCAGGAGACAGGGGGACACGAGGAGCAAAGCCAGGATTTCACAATGGAGAACATGTTGCAGACTTCAATCTTCCCAGAATTATGAACCCGCATGCTGCAGAATTTGTACCTTGTCAACCATGGCTTCCGAATGGATACCCGGTATCTCCAAATGGGTATTTGGCGGTGCCCAATGGGATGCCAGTGTCTCCAAATGGTTATGCTGTGCCTCCAAATGGTATGCCAGTATCACCTAATGATTTTCCACCTGTCATGAATGACATTCCGGTGGCTCAGAATGGATTGGCACCAACTTCTAATGGTTCTTTGGATTCTGATGTTGAAACTGCTCCTGTAAATACTGATGTGGCTGTAACTGAAGGAAACACAGACAACATTTCAATAGAAACAGCTACTGACTCGCCCAAGCAAGATGCAGAAACAGAAGATGGAGAAGGGATTGGTAGTCCAGGGACCAAAGATTCCCACACACCCACACCCGCAGCTTTACCAGATGGCGCTCATGTGGTGACCAAAGAAACTGATGACAATGTTGTAGTCGAGGAAAAACCCAACAAATGCTGGGGAGATTATAGTGATGGTGAAGTTGCAGAAGTCGAAGTTGTTGAGGTCACTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_141952.p1 GENE.R_Transcript_141952~~R_Transcript_141952.p1 ORF type:complete len:873 (+),score=216.39,TPR_12|PF13424.2|1.1e-10,TPR_12|PF13424.2|8.7e-11,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|2.9e-07,TPR_10|PF13374.2|2 R_Transcript_141952:758-3376(+)
MKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPEAELRAREAQRKQARAKVKNKTGQTGEQAADQSPKDETSPSSFPAENNSDKENKTEPDLPEPVDKTKVNPAVEIVSTQIADLNQDDTSDEGWQEAVPKSRSNIGRKPSASRRPSLAKLNTNFVNQQSRYRGKAGNFTSPRTPSSDSATPSPSSATKKFGKSPSFSPKQICNTTASAAQAEKSANPKPVPQSPAPVEQVGKSAPLASSLNVQTAGKLFSYKEVALAPPGTIVKAVVEQSKDSGLPEQNPGSNQETTNTGSTQSEGKSALDKADEEKAQKPLKDEEKKSTTSVAETKSEEDVEKVQPANQVETSTSTDKEGEIKANVGGGNSDTVLSSDLKDGEVAESKESENTQVLKSEGSSNGSLSGNELSETGGSDKCPETSPLSDSEPVSNGNGNFEGIAGSDSDGMTSPTEGEKLTKKLSASAPPFNPSTVPVFGSVPVQGFKDHGGILPAPVNIAPMISVNPVRRSPHQSATARVPYGPRLSGGYNRSGDRGTRGAKPGFHNGEHVADFNLPRIMNPHAAEFVPCQPWLPNGYPVSPNGYLAVPNGMPVSPNGYAVPPNGMPVSPNDFPPVMNDIPVAQNGLAPTSNGSLDSDVETAPVNTDVAVTEGNTDNISIETATDSPKQDAETEDGEGIGSPGTKDSHTPTPAALPDGAHVVTKETDDNVVVEEKPNKCWGDYSDGEVAEVEVVEVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST