Transcript Information: R_Transcript_142059.p1


Annotated TAIR IDAT5G52110.1
Annotated Gene NameProtein of unknown function (DUF2930)
Annotated Gene Symbol(s)HCF208, CCB2
Annotation TypeOrtholog
Chromosome Positionchr5:21172653-21173953 | Reverse length=275
E-Value5.4E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8820464665345
Replicate 21.5194691090742
Replicate 32.6372888679781
Condition 2: 8 Hour
Replicate 11.2887297340655
Replicate 22.2066659711696
Replicate 32.388369818472
Condition 3: 24 Hour
Replicate 12.1145348762359
Replicate 22.1765058115701
Replicate 32.2319698858349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142059.p1 GENE.R_Transcript_142059~~R_Transcript_142059.p1 ORF type:complete len:304 (+),score=45.59,DUF2930|PF11152.4|1.5e-51 R_Transcript_142059:672-1583(+)
ATGAACACACTTCCCTTAAATCAGTTATTGCCGTTAACCCTAGAATTCCCATTTCGCGCCAACTGTTCTCATCAATTTCATCATGCTACCCCTCTCAACACCAGAAGAATTCCAAGAAAACCTTTGAAATTTTATGCTCAAATTGATGAATCTTCAAAACCCACTAGCACTCAGGACCAAGTTAACCTCTCCGTTCTTCGCTTCACTTTTGGAATATCTTGGTTAGATGAATCTTACTTGCCCAGATGGATTGGGTATGGTTTCGGATTTCTCATTATTTTGAACCATCTTGTGGATTCAAGTTCTGTGTCCTCAGCTCAGTTTGTATCAGAAGCTTTGGGTTTTTCGTTAGCAGCTTTCTCTGTCACCCTCCCATTTGTGGGAAGATTTCTTGAGGGAGCAACGGGAGAGGAGGTCACAAGTCTCCCTGAACAAGCACAACAAATTTTTGTGATGTCAAAAAATGTTGCAGATACAATGAGGGAGGACCTGGCTTGGGCGACTTATATTCTACTTCGAAATACGAAATCGATGTCAGTTCTCATATCTCTGCAAGATGTAATATGTGTACGTGGCTATTGGAACACACCAGAAAGTTTATCAAAGGATGAGATTCTTGACTGGTTTATGGGCCAAATCAAGAATTTTGGGCTGTCTGATGTGAAAGAGTCACTCTATTTTCCACAAAGCACAGGTTCAATCCTGGAGGAGGCTGTTCCTGATGGAACTGGCTCTATTTTGATAGAGCCAGTGAACAGTTCAACTATGAGTACGGGAAAAGAGAATGTCTTAGGATTTGTCTTGCTAGCTTCAAGTATAAACTATGCCTACAGTGATAAAGACAGGCTGTGGATACAAGCCATTGCCAAAAAATTTAGAGGTGAGACCCTCTTCATTGGCACTGCAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142059.p1 GENE.R_Transcript_142059~~R_Transcript_142059.p1 ORF type:complete len:304 (+),score=45.59,DUF2930|PF11152.4|1.5e-51 R_Transcript_142059:672-1583(+)
MNTLPLNQLLPLTLEFPFRANCSHQFHHATPLNTRRIPRKPLKFYAQIDESSKPTSTQDQVNLSVLRFTFGISWLDESYLPRWIGYGFGFLIILNHLVDSSSVSSAQFVSEALGFSLAAFSVTLPFVGRFLEGATGEEVTSLPEQAQQIFVMSKNVADTMREDLAWATYILLRNTKSMSVLISLQDVICVRGYWNTPESLSKDEILDWFMGQIKNFGLSDVKESLYFPQSTGSILEEAVPDGTGSILIEPVNSSTMSTGKENVLGFVLLASSINYAYSDKDRLWIQAIAKKFRGETLFIGTAA*

Click here to download the sequence:
Link to NCBI Protein BLAST