Transcript Information: R_Transcript_142060.p1


Annotated TAIR IDAT5G52110.1
Annotated Gene NameProtein of unknown function (DUF2930)
Annotated Gene Symbol(s)HCF208, CCB2
Annotation TypeHomolog
Chromosome Positionchr5:21172653-21173953 | Reverse length=275
E-Value4E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.97067436472658
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142060.p1 GENE.R_Transcript_142060~~R_Transcript_142060.p1 ORF type:complete len:187 (+),score=27.06,DUF2930|PF11152.4|5.5e-35 R_Transcript_142060:805-1365(+)
ATGCTCAAATTGATGAATCTTCAAAACCCACTAGCACTCAGGACCAAGTTAACCTCTCCGTTCTTCGCTTCACTTTTGGGAGCAACGGGAGAGGAGGTCACAAGTCTCCCTGAACAAGCACAACAAATTTTTGTGATGTCAAAAAATGTTGCAGATACAATGAGGGAGGACCTGGCTTGGGCGACTTATATTCTACTTCGAAATACGAAATCGATGTCAGTTCTCATATCTCTGCAAGATGTAATATGTGTACGTGGCTATTGGAACACACCAGAAAGTTTATCAAAGGATGAGATTCTTGACTGGTTTATGGGCCAAATCAAGAATTTTGGGCTGTCTGATGTGAAAGAGTCACTCTATTTTCCACAAAGCACAGGTTCAATCCTGGAGGAGGCTGTTCCTGATGGAACTGGCTCTATTTTGATAGAGCCAGTGAACAGTTCAACTATGAGTACGGGAAAAGAGAATGTCTTAGGATTTGTCTTGCTAGCTTCAAGTATAAACTATGCCTACAGTGATAAAGACAGGCTGTGGATACAAGCCATTGCCAAAAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142060.p1 GENE.R_Transcript_142060~~R_Transcript_142060.p1 ORF type:complete len:187 (+),score=27.06,DUF2930|PF11152.4|5.5e-35 R_Transcript_142060:805-1365(+)
MLKLMNLQNPLALRTKLTSPFFASLLGATGEEVTSLPEQAQQIFVMSKNVADTMREDLAWATYILLRNTKSMSVLISLQDVICVRGYWNTPESLSKDEILDWFMGQIKNFGLSDVKESLYFPQSTGSILEEAVPDGTGSILIEPVNSSTMSTGKENVLGFVLLASSINYAYSDKDRLWIQAIAKKI*

Click here to download the sequence:
Link to NCBI Protein BLAST