Transcript Information: R_Transcript_1422.p1


Annotated TAIR IDAT1G77110.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN6
Annotation TypeOrtholog
Chromosome Positionchr1:28970855-28974408 | Forward length=570
E-Value1.7E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.024725907387
Replicate 27.7549149778789
Replicate 310.820268010243
Condition 2: 8 Hour
Replicate 17.8133287645732
Replicate 27.1352562659059
Replicate 38.3460923204292
Condition 3: 24 Hour
Replicate 110.267562026461
Replicate 26.7052420245222
Replicate 311.32881197362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1422.p1 GENE.R_Transcript_1422~~R_Transcript_1422.p1 ORF type:5prime_partial len:398 (+),score=45.38,Mem_trans|PF03547.14|1.9e-81 R_Transcript_1422:3-1196(+)
GGGTTCGGTGGGAGGCTATCGAATTTCGGCCCTGCTGAGCTGTACTCAGTTCAGTCCTCTCGTGGACCCACTCCCCGACCCTCCAACTTCGAGGCAGATAACCCGAGTTCTTCCCCTAAGTTTGGGTTCTATCCCAGTGCCACCGGTCCGGGTTTGGGGGCTGGGTCTTATCCTGCTCCGAATCCGGACCTTGTTGGTGTCGGGGTTGGAGTTGGGGCCAAAGGATCTGGAGGTGGCGGAAAGAGTAGTAGTACTAATACTAGTCAGGTACAGCAGAATAGTGTGAGTCAGAGTCAATGGCAGCAGAATCACCACCAAAGTAAGCTTAGCCATGACGCTAAGGAGTTGCATATGTTCGTGTGGAGTTCAAGTGCTTCCCCTGTGTCTGAAGTTGGAGGGCTCCACGTCTTTGGTAGCGCTGATTTAGGCACTCCTGATCAATCTGGGCGTTCTGATCATGGTGCCAAGGAAATCCGTATGTTGGTCTCTGATCACCCTCAAAATGGCGAATCGAAAGGAGCACCTGAAGGGGAGGAATACGGTGGAGAGAATTACAGCTTCACAGGAGAAGAAGAAAGGGAAAAGGAAGGAGCCATGGGGATTGGGCTGAACAAATTAGGATCAAGTTCGACGGCAGAGTTACACCCGAAACCGGGTGACGGACCGGAAACTGTTACCGGAAAACATATGCCACCGGCGAGTGTCATGACGCGCTTGATTTTAATCATGGTTTGGAGGAAGCTTATCCGTAACCCCAACACGTATTCCAGTCTCATTGGTCTAATTTGGTCTTTGGGTTCTTTTCGGTGGCATGTGCCAATGCCCAAAATAATTAAGAACTCTATCTCGATTCTCTCAGATGCTGGCCTTGGAATGGCTATGTTCAGCTTAGGTTTGTTTATGGCTCTACAACCGAAGATCATTGCGTGTGGAAATACAGTTGCTGCCTTTTCCATGGCCATAAGATTTCTCAGTGGTCCCGCAGTCATGGCTGTGGCTTCCATTGCCATTGGCTTGAGGGGTAACCTCCTTCGAATCGCTATTGTTCAGGCAGCACTTCCTCAAGGAATAGTTCCATTCGTATTTGCCAAAGAATATAACAATCATCCAGCAATTCTAAGTACTGCGGTGATCTTTGGGATGTTGATAGCACTACCCATTACGTTGGTTTACTACATTCTTCTAGGACTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1422.p1 GENE.R_Transcript_1422~~R_Transcript_1422.p1 ORF type:5prime_partial len:398 (+),score=45.38,Mem_trans|PF03547.14|1.9e-81 R_Transcript_1422:3-1196(+)
GFGGRLSNFGPAELYSVQSSRGPTPRPSNFEADNPSSSPKFGFYPSATGPGLGAGSYPAPNPDLVGVGVGVGAKGSGGGGKSSSTNTSQVQQNSVSQSQWQQNHHQSKLSHDAKELHMFVWSSSASPVSEVGGLHVFGSADLGTPDQSGRSDHGAKEIRMLVSDHPQNGESKGAPEGEEYGGENYSFTGEEEREKEGAMGIGLNKLGSSSTAELHPKPGDGPETVTGKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLGSFRWHVPMPKIIKNSISILSDAGLGMAMFSLGLFMALQPKIIACGNTVAAFSMAIRFLSGPAVMAVASIAIGLRGNLLRIAIVQAALPQGIVPFVFAKEYNNHPAILSTAVIFGMLIALPITLVYYILLGL*

Click here to download the sequence:
Link to NCBI Protein BLAST