Transcript Information: R_Transcript_142220.p1


Annotated TAIR IDAT5G39940.1
Annotated Gene NameFAD/NAD(P)-binding oxidoreductase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15987649-15990561 | Forward length=480
E-Value2.4E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8925462352854
Replicate 22.1212757121621
Replicate 32.2670585662172
Condition 2: 8 Hour
Replicate 13.0796654882102
Replicate 22.4896651946887
Replicate 33.2934881125651
Condition 3: 24 Hour
Replicate 13.7395191154405
Replicate 22.6375361147494
Replicate 34.1970237853226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142220.p1 GENE.R_Transcript_142220~~R_Transcript_142220.p1 ORF type:complete len:485 (+),score=94.79,HI0933_like|PF03486.10|7.5e-115,Pyr_redox_2|PF07992.10|6.2e-07,FAD_binding_2|PF00890.20|1.3e-06 R_Transcript_142220:3561-5015(+)
ATGACGATGATGATAAGCAGCTTAACTGAACTGAGCTTCTTCACCCTCCAAAATCACGCTATTTCACATACTTCTAATAACATCCCACCAAAGAGGTCCAAATCAACAAAGTTGCCATGTTATGCATCCCAAATTAGCCCAAAGTCCAATGAAGAGGAGCTGTTGGTGGTGGTGGGTGGTGGAGCTGCTGGAATTTACGGCGCAATTCGGGCCAAAACTGTTACACCTCAGCTTAATGTTGTAGTTATTGAGAAGGGAAAGCCTCTCTCTAAGGTAAAGATTTCTGGAGGAGGTAGATGCAATGTGACTAATGGGCATTCTACTGACAATATGACTCTAGCAGAACATTACCCTCGGGGAAACAAAGAATTGAGGGGATCCTTCTTTAGCATGCATAGCCCTGCGGATACTATGTCTTGGTTTATGGAGCATGGGGTGAAACTAAAGACTGCAAGTGATGGTCGGGTCTTTCCTGTCAGTAATAGCTCATCATCAATAATTGACTGCCTTATGACTGAAGCAAAGCAAAGAGGAGTTTCAGTGCAGACAGGAAAGACTGTAATTACTGCATCTAGCACTGATGCTGGAAAGTTCTGCGTTGAGACTGAGAAGCATGCTTCTGCTTCTGCTGACTATATTGAAGCTGACTATCTTTTAATTGCTACTGGAAACAGCAAGCAGGGCTATAGTCTTGCAGGTCAGCTTGGCCATTCTATAATAGATCCTGTACCCAGCCTCTTCACATTCAAGATCAAAGACTCCAACTTGGCTGAACTGTCAGGGGTTACTTTCGCCAAGGTGAAAGTTAGATTGAAATTGGAAAACAGCAGAAGAAACTTACCACAACTTACACAGGTTGGACCAATGCTAGTCACTCACTGGGGGCTCAGTGGTCCTGTAATTCTTCGGCTGTCTGCTTGGGCTGCACGTGAACTTTACAGTTCAGGCTATAAAGGAACACTTACTGTGGATTTTGCACCTGATCTTCACAGAGAAAACGTGAAATCGATCCTCCTTAACCACAAAAAGTTGTTTGGGAAGCAGAAGGTGGTGAATTCCACTCCCTCGGAATTCGGCCTTGTCAAAAGATGTTGGAAATATTTACTGAATCGAAAGGGTATAGTTGATGATATCTTGTGGGCTTCCTTTTCAAATGATGCATTGTTCTCTGTTGCCTCCCTGCTAAAAGAGTGTTCATTTGAACTGACAGGAAAGGGCCAATTCAAAGATGAATTTGTCACTGCTGGAGGTATTCCGTTGTCTGAGATTTCATTGAACACAATGGAGAGCAAAGTAAAGCCAAACTTATTCTTTGCTGGAGAGATATTGAACATAGATGGTGTAACTGGTGGATTCAATTTTCAGAATGCTTGGACGGGTGGATATATTGCCGGTACAAGTATCGGGAACTTGGCAGCTAGAGCTCCACCGACAGGGAGAGTTCCACGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142220.p1 GENE.R_Transcript_142220~~R_Transcript_142220.p1 ORF type:complete len:485 (+),score=94.79,HI0933_like|PF03486.10|7.5e-115,Pyr_redox_2|PF07992.10|6.2e-07,FAD_binding_2|PF00890.20|1.3e-06 R_Transcript_142220:3561-5015(+)
MTMMISSLTELSFFTLQNHAISHTSNNIPPKRSKSTKLPCYASQISPKSNEEELLVVVGGGAAGIYGAIRAKTVTPQLNVVVIEKGKPLSKVKISGGGRCNVTNGHSTDNMTLAEHYPRGNKELRGSFFSMHSPADTMSWFMEHGVKLKTASDGRVFPVSNSSSSIIDCLMTEAKQRGVSVQTGKTVITASSTDAGKFCVETEKHASASADYIEADYLLIATGNSKQGYSLAGQLGHSIIDPVPSLFTFKIKDSNLAELSGVTFAKVKVRLKLENSRRNLPQLTQVGPMLVTHWGLSGPVILRLSAWAARELYSSGYKGTLTVDFAPDLHRENVKSILLNHKKLFGKQKVVNSTPSEFGLVKRCWKYLLNRKGIVDDILWASFSNDALFSVASLLKECSFELTGKGQFKDEFVTAGGIPLSEISLNTMESKVKPNLFFAGEILNIDGVTGGFNFQNAWTGGYIAGTSIGNLAARAPPTGRVPRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST