Transcript Information: R_Transcript_142257.p1


Annotated TAIR IDAT5G62550.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25105839-25107875 | Reverse length=487
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.960715931376
Replicate 213.842693637294
Replicate 313.683228210091
Condition 2: 8 Hour
Replicate 18.4508737428545
Replicate 28.5090081342565
Replicate 38.6742210044327
Condition 3: 24 Hour
Replicate 115.745398762363
Replicate 212.393884420811
Replicate 314.720934125701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142257.p1 GENE.R_Transcript_142257~~R_Transcript_142257.p1 ORF type:complete len:226 (-),score=44.11 R_Transcript_142257:287-964(-)
ATGTGCTCTTCTTCTACTTCTATTCAGCCTCTGCAGCTACTGCGTGAGGAGTTAAAATCCTATGTAAGGAGGCACAATCTTGCTGATTATGGAGACACTATCAGAGATTTAAATAACAGCTATGAAATATCAGAGACCTTGGAACTGTTACAAGTATCTGAGATCTGCTCTCATGTGGTTGAAGGAGCAAGTAGTCTCTCTGATGAGAGCGCCACTTCTACAGCAGATACTAGGAAGCTCAAACCAAAATCATTGAACACCGATGCTCAGACGTCTTCAGCCAAAGTATCTTCCAGGAAGGACAATGCTCAGAGAACCACTGCAGTGGTTAAGACCAGGGTATCAGTTAATTGCAACCCGAGAGTAAATGCAGAAAGTGGGGCTAATAATATCAAGAAGAAACTTCACAAGTCAGGCAAGCAACAGTTGAATATAGGAGAAGAGATGATCAAGAATGATGAAGAAAAGTCGGTCTCTGAAGAAGGTAATTGGCATCATAGTAGAAATTGCTTTTGCAACAAGTTAGCTAATAAGCAGAAAGATTTACTTGTCTGTCTATTATATGCAGTTGCTACCAAGAGAGTGGACATGGAGGGAACACTGGAAGGAAACAAAGAAAACCTGGTACTTTATGTTTGTCCGAAGAGTTTTCTTCAGTCAACATCAGTAAACATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142257.p1 GENE.R_Transcript_142257~~R_Transcript_142257.p1 ORF type:complete len:226 (-),score=44.11 R_Transcript_142257:287-964(-)
MCSSSTSIQPLQLLREELKSYVRRHNLADYGDTIRDLNNSYEISETLELLQVSEICSHVVEGASSLSDESATSTADTRKLKPKSLNTDAQTSSAKVSSRKDNAQRTTAVVKTRVSVNCNPRVNAESGANNIKKKLHKSGKQQLNIGEEMIKNDEEKSVSEEGNWHHSRNCFCNKLANKQKDLLVCLLYAVATKRVDMEGTLEGNKENLVLYVCPKSFLQSTSVNI*

Click here to download the sequence:
Link to NCBI Protein BLAST