Transcript Information: R_Transcript_142518.p1


Annotated TAIR IDAT3G54690.1
Annotated Gene NameSugar isomerase (SIS) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20246586-20247810 | Forward length=350
E-Value6.7E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.520502764581
Replicate 228.569746021004
Replicate 334.326518802445
Condition 2: 8 Hour
Replicate 127.717137447615
Replicate 227.934708693094
Replicate 339.76320566988
Condition 3: 24 Hour
Replicate 143.424591383781
Replicate 241.005965210047
Replicate 347.498244775085


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142518.p1 GENE.R_Transcript_142518~~R_Transcript_142518.p1 ORF type:complete len:341 (+),score=65.86,SIS|PF01380.18|6.5e-22,CBS|PF00571.24|4.1e+02,CBS|PF00571.24|5.6e-05,CBS|PF00571.24|6.6e-06,SIS_2|PF13580.2|17,SIS_2|PF13580.2|9.7e-05 R_Transcript_142518:196-1218(+)
ATGGGATCTTTACCACCAAGTTCAGTTCTTGATAACCCAAAACAACCCCAGAAATTAGATGAAACAACCCTCTTAAACCTCTTCAAATCCCAACAAAAATACCTCAACCATTTCTTCCAAAACTTAGACCTTTCACAGACCCTAAAATTCACCCAAACCCTCCTAAATTCCAAAGGCACAATCTTTTTCACAGGGGTAGGGAAATCAGGCTTTGTTGCCCAAAAGATCTCACAGACATTAATATCATTAGGAATCAAATCTGGGTTTTTATCCCCTGTGGATGCCCTTCATGGGGACATTGGTATTGTCTCAAAAGAAGATGTGATTGTGTTGTTTAGTAAGTCAGGGAATAGTGAAGAGCTTATAAGATTAGCCCCTTGTGCTAAGGCTAAAGGTGCTTTCTTGATTGGGGTTACATCAAATGAGTCAAATAATTTGATGGGTTTTTGTGATATGAATGTGCATTTGCCTCTTGAAAGGGAATTGTGCCCTTTTGATTTGGCTCCTGTTACATCTACTGCTATTCAGATGGTTTTTGGGGATACTGTTGCTATTGCTTTGATGGGGGCTAGGAATTTGTCCAAAGAGGAGTATGCTTCTAATCACCCTGCTGGGAAAATTGGGAAAAGCCTCATCTTTAAGGTTAAGGATGTCATGAAAAAGCAAGAGGAACTTCCTGTTTGCAAGGAAGGTGACCTTATAATGGATCAGCTAGTAGAGCTTACCAGTAAAGGATGTGGATGTCTTCTTGTTATTGATGAAGCTCACCATCTAATTGGCACCTTTACTGATGGAGATCTGAGGCGTACACTTAAAGCTAGTGGAGAAGGGATCTTTAAGCTCACCGTTGGAGAGATGTGCAACAGGCACCCTAGGATAATCGGTCCAGACGCTATGGCAGTCGAGGCCATGCAAAAGATGGAGTCCCCACCATCTCCAGTGCAATTTCTGCCAGTGATTAATGACGAAAACATCTTGATAGGGATTGTGACCTTGCACGGATTGGTCGCTGCAGGCTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142518.p1 GENE.R_Transcript_142518~~R_Transcript_142518.p1 ORF type:complete len:341 (+),score=65.86,SIS|PF01380.18|6.5e-22,CBS|PF00571.24|4.1e+02,CBS|PF00571.24|5.6e-05,CBS|PF00571.24|6.6e-06,SIS_2|PF13580.2|17,SIS_2|PF13580.2|9.7e-05 R_Transcript_142518:196-1218(+)
MGSLPPSSVLDNPKQPQKLDETTLLNLFKSQQKYLNHFFQNLDLSQTLKFTQTLLNSKGTIFFTGVGKSGFVAQKISQTLISLGIKSGFLSPVDALHGDIGIVSKEDVIVLFSKSGNSEELIRLAPCAKAKGAFLIGVTSNESNNLMGFCDMNVHLPLERELCPFDLAPVTSTAIQMVFGDTVAIALMGARNLSKEEYASNHPAGKIGKSLIFKVKDVMKKQEELPVCKEGDLIMDQLVELTSKGCGCLLVIDEAHHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRHPRIIGPDAMAVEAMQKMESPPSPVQFLPVINDENILIGIVTLHGLVAAGL*

Click here to download the sequence:
Link to NCBI Protein BLAST