Transcript Information: R_Transcript_142537.p1


Annotated TAIR IDAT5G04770.1
Annotated Gene Namecationic amino acid transporter 6
Annotated Gene Symbol(s)ATCAT6, CAT6
Annotation TypeHomolog
Chromosome Positionchr5:1379118-1382304 | Forward length=583
E-Value5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5541685977593
Replicate 21.469024431857
Replicate 32.5408497333616
Condition 2: 8 Hour
Replicate 11.1281883166819
Replicate 20.83948703158035
Replicate 31.1770669002981
Condition 3: 24 Hour
Replicate 11.3320229449521
Replicate 21.5807523436933
Replicate 31.6807964350006


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142537.p1 GENE.R_Transcript_142537~~R_Transcript_142537.p1 ORF type:complete len:586 (+),score=68.57,AA_permease_2|PF13520.2|3.7e-45,AA_permease|PF00324.17|4.3e-25,AA_permease|PF00324.17|1.8e+03,AA_permease_C|PF13906.2|5.8e+03,AA_permease_C|PF13906.2|1.2e+04,AA_permease_C|PF13906.2|1.1e-11 R_Transcript_142537:1287-3044(+)
ATGGAAAACACACAAAAGTGTTCTAACAACAACATTTCATTCACTAAATGCCTTCATTCTCTGTCACAAACGCCTCACAAGCTTAAAAAGAGAATGTTAGCTACATGGACTCCTGACCAAGAGCTGAACCGAGTGAGGCTAAGGTCAGGTGCAGACATGAAAAGGAAGCTAAACTGGTTCGATTTAATCGCCCTCGGTGTAGGGGGAATGCTTGGGGTGGGTGTCTTTGTGACAACAGGTCCAGTGGCTCGGACTATAGCCGGTCCCGCTGTCTTTATCTCATATATGATTGCTGGCGTATCAGCTCTCCTTTCCTCCATGTGTTACACGGAATTCTCCATCGCTATCCCTGTGGCTGGAGGTGCTTTTAGTTATCTCAGACTCACTTTTGGGGAGTTTGTGGGGTACTTTGCTGGTTCAAATATACTGATGGAATACGTGTTATCAAATGCTGCGGTTGCCAGAAGTTTCACTGAGTATTTAAGCGGCACATTTGGAGTGCAAGACCCCAACTCATGGAGGGTTGAAGTTCATGAGTTTGTCAAGGGCTACAACATGTTGGATTTCCCTGCTGTCGCTCTTATTCTTCTCCTCACTCTATTTTTGTGCCACAGTACTAAGGAGAGCTCAATATTAAACCTAACTATGACAATCTTCCATGTTGTCTTCTTCGGGTTCATCATTATTGTGGGTTTTTGGAAAGGGAATCCAAAGAACTTGGTAAGCTCACCAGGAGGATTGGCTCCTTTTGGCATCAAAGGTGTGCTTGATGGAGCAGCCATTGTATATTTCAGCTACATAGGCTATGATTCAGTGTCAACACTTGCAGAAGAAATCAGAAACCCTTCAAGAAATCTCCCAGTGGGCATCGTGGGGTCTGTTCTTGTTGTCTCAGCCCTATATTGTCTTATGGCATTAGCCTTGTGTCTCATGGCTCCGTACAATGAGATATCAGGTAGAGGTTCATTTGCAATGGTATTTCAAAACATGGGATGGAAGTGGGCAAGCAATGTTGTTGGAGTGGGTGCAAGCTTGGGAATAGTGGCATCCCTTTTGGTTGCCATGCTTGGCCAGGCTCGATACCTCTGTGTCATTGCAAGAGCCAGGCTTGTCCCTGTTTGGTTTGCCAAGGTTCATCCTTCAACTGGCACTCCCCTGAATGCTACTCTTTTCTTGGGGTTATGCACAGCATCAATAGCCCTCTTCACAGACCTTGAGATAGTCCTGGAGATAATATCCATAGGCACACTCCTTGTATTCTACTTGGTAGCAAATGCACTTATATACAGACGTTATGCAATTATGAGCAGCAACCCTCCATTGCAAATCCTCTTGTTTCTTTTCCTCCTTACAGCCACCTCATTGGGTTTCTCTTTATCATGGAAACTTGAGCAACAATACGGGTGGGGCCTTCCGTTATTCGGAGGGTCCTTGATCACCATTACAGCCTTGTTTCATTACATGGTGCCTTCGTCTTCCATTGGACAACAGCTTGAATGGTCAGTACCCTTGATGCCTTGGCCTGCTGCAATATCTATATTTCTCAATGTCTTCCTCATGACAACCTTAAACATCAAGTCATTTCAAAGGTTTGGTATTTGGACATGTTTTATAGTTTTGTTTTATCTACTCTATGGTGTTCACTCCACTTACCGAGCTGAAGAAATGGAGATGAATATGGTCGGTGGAAATAATGGGGTCACCACAAACTATACCATATCTCAGGATACTAAAATAGATGCAATCCAACAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142537.p1 GENE.R_Transcript_142537~~R_Transcript_142537.p1 ORF type:complete len:586 (+),score=68.57,AA_permease_2|PF13520.2|3.7e-45,AA_permease|PF00324.17|4.3e-25,AA_permease|PF00324.17|1.8e+03,AA_permease_C|PF13906.2|5.8e+03,AA_permease_C|PF13906.2|1.2e+04,AA_permease_C|PF13906.2|1.1e-11 R_Transcript_142537:1287-3044(+)
MENTQKCSNNNISFTKCLHSLSQTPHKLKKRMLATWTPDQELNRVRLRSGADMKRKLNWFDLIALGVGGMLGVGVFVTTGPVARTIAGPAVFISYMIAGVSALLSSMCYTEFSIAIPVAGGAFSYLRLTFGEFVGYFAGSNILMEYVLSNAAVARSFTEYLSGTFGVQDPNSWRVEVHEFVKGYNMLDFPAVALILLLTLFLCHSTKESSILNLTMTIFHVVFFGFIIIVGFWKGNPKNLVSSPGGLAPFGIKGVLDGAAIVYFSYIGYDSVSTLAEEIRNPSRNLPVGIVGSVLVVSALYCLMALALCLMAPYNEISGRGSFAMVFQNMGWKWASNVVGVGASLGIVASLLVAMLGQARYLCVIARARLVPVWFAKVHPSTGTPLNATLFLGLCTASIALFTDLEIVLEIISIGTLLVFYLVANALIYRRYAIMSSNPPLQILLFLFLLTATSLGFSLSWKLEQQYGWGLPLFGGSLITITALFHYMVPSSSIGQQLEWSVPLMPWPAAISIFLNVFLMTTLNIKSFQRFGIWTCFIVLFYLLYGVHSTYRAEEMEMNMVGGNNGVTTNYTISQDTKIDAIQQL*

Click here to download the sequence:
Link to NCBI Protein BLAST