Transcript Information: R_Transcript_142539.p1


Annotated TAIR IDAT5G04770.1
Annotated Gene Namecationic amino acid transporter 6
Annotated Gene Symbol(s)ATCAT6, CAT6
Annotation TypeHomolog
Chromosome Positionchr5:1379118-1382304 | Forward length=583
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1201642657639
Replicate 20.71782223645464
Replicate 31.7620567381656
Condition 2: 8 Hour
Replicate 10.62784269095501
Replicate 20.95559324107631
Replicate 30.93085182668651
Condition 3: 24 Hour
Replicate 11.5697645967661
Replicate 21.8850648624425
Replicate 31.4965951922665


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142539.p1 GENE.R_Transcript_142539~~R_Transcript_142539.p1 ORF type:5prime_partial len:117 (+),score=16.20 R_Transcript_142539:1-351(+)
CTAGCTTTGAGGAAAAAGGTCGATAAGACACAACTTAAGTATGAATTATCCTTGATAGTTCTTTCCTCAGAAAAGAGACATTTTGCATCCACAGGGGAGTTTGTGGGGTACTTTGCTGGTTCAAATATACTGATGGAATACGTGTTATCAAATGCTGCGGTTGCCAGAAGTTTCACTGAGTATTTAAGCGGCACATTTGGAGTGCAAGACCCCAACTCATGGAGGGTTGAAGTTCATGAGTTTGTCAAGGGCTACAACATGTTGGATTTCCCTGCTGTCGCTCTTATTCTTCTCCTCACTCTATTTTTGTGCCACAGGTATATATTTACTTTCATAGTCTCTTCCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142539.p1 GENE.R_Transcript_142539~~R_Transcript_142539.p1 ORF type:5prime_partial len:117 (+),score=16.20 R_Transcript_142539:1-351(+)
LALRKKVDKTQLKYELSLIVLSSEKRHFASTGEFVGYFAGSNILMEYVLSNAAVARSFTEYLSGTFGVQDPNSWRVEVHEFVKGYNMLDFPAVALILLLTLFLCHRYIFTFIVSSN*

Click here to download the sequence:
Link to NCBI Protein BLAST