Transcript Information: R_Transcript_142541.p2


Annotated TAIR IDAT5G04770.1
Annotated Gene Namecationic amino acid transporter 6
Annotated Gene Symbol(s)ATCAT6, CAT6
Annotation TypeHomolog
Chromosome Positionchr5:1379118-1382304 | Forward length=583
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37250940723916
Replicate 20
Replicate 30.3116562938252
Condition 2: 8 Hour
Replicate 10
Replicate 20.30422968491409
Replicate 30.12348034435637
Condition 3: 24 Hour
Replicate 10
Replicate 20.15003577476583
Replicate 30.297791900502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142541.p2 GENE.R_Transcript_142541~~R_Transcript_142541.p2 ORF type:complete len:147 (+),score=8.68,AA_permease_2|PF13520.2|1.1e-08,AA_permease|PF00324.17|6.6e-06 R_Transcript_142541:1287-1727(+)
ATGGAAAACACACAAAAGTGTTCTAACAACAACATTTCATTCACTAAATGCCTTCATTCTCTGTCACAAACGCCTCACAAGCTTAAAAAGAGAATGTTAGCTACATGGACTCCTGACCAAGAGCTGAACCGAGTGAGGCTAAGGTCAGGTGCAGACATGAAAAGGAAGCTAAACTGGTTCGATTTAATCGCCCTCGGTGTAGGGGGAATGCTTGGGGTGGGTGTCTTTGTGACAACAGGTCCAGTGGCTCGGACTATAGCCGGTCCCGCTGTCTTTATCTCATATATGATTGCTGGCGTATCAGCTCTCCTTTCCTCCATGTGTTACACGGAATTCTCCATCGCTATCCCTGTGGCTGGAGGTGCTTTTAGTTATCTCAGACTCACTTTTGGTATGAAACTGAAAACTCAACTTTTTGCTGATTATCGCTCCTACTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142541.p2 GENE.R_Transcript_142541~~R_Transcript_142541.p2 ORF type:complete len:147 (+),score=8.68,AA_permease_2|PF13520.2|1.1e-08,AA_permease|PF00324.17|6.6e-06 R_Transcript_142541:1287-1727(+)
MENTQKCSNNNISFTKCLHSLSQTPHKLKKRMLATWTPDQELNRVRLRSGADMKRKLNWFDLIALGVGGMLGVGVFVTTGPVARTIAGPAVFISYMIAGVSALLSSMCYTEFSIAIPVAGGAFSYLRLTFGMKLKTQLFADYRSYY*

Click here to download the sequence:
Link to NCBI Protein BLAST