Transcript Information: R_Transcript_142542.p1


Annotated TAIR IDAT5G04770.1
Annotated Gene Namecationic amino acid transporter 6
Annotated Gene Symbol(s)ATCAT6, CAT6
Annotation TypeHomolog
Chromosome Positionchr5:1379118-1382304 | Forward length=583
E-Value6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19013500994499
Replicate 20
Replicate 30.53687666240982
Condition 2: 8 Hour
Replicate 10.44635691310082
Replicate 20.17469438938426
Replicate 30.1890792772957
Condition 3: 24 Hour
Replicate 10.41850169425502
Replicate 20
Replicate 30.056999230955462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142542.p1 GENE.R_Transcript_142542~~R_Transcript_142542.p1 ORF type:internal len:384 (+),score=53.54,AA_permease_2|PF13520.2|6.2e-36,AA_permease|PF00324.17|2.3e-16 R_Transcript_142542:1-1149(+)
CTAGCTTTGAGGAAAAAGGTCGATAAGACACAACTTAAGTATGAATTATCCTTGATAGTTCTTTCCTCAGAAAAGAGACATTTTGCATCCACAGGGGAGTTTGTGGGGTACTTTGCTGGTTCAAATATACTGATGGAATACGTGTTATCAAATGCTGCGGTTGCCAGAAGTTTCACTGAGTATTTAAGCGGCACATTTGGAGTGCAAGACCCCAACTCATGGAGGGTTGAAGTTCATGAGTTTGTCAAGGGCTACAACATGTTGGATTTCCCTGCTGTCGCTCTTATTCTTCTCCTCACTCTATTTTTGTGCCACAGTACTAAGGAGAGCTCAATATTAAACCTAACTATGACAATCTTCCATGTTGTCTTCTTCGGGTTCATCATTATTGTGGGTTTTTGGAAAGGGAATCCAAAGAACTTGGTAAGCTCACCAGGAGGATTGGCTCCTTTTGGCATCAAAGGTGTGCTTGATGGAGCAGCCATTGTATATTTCAGCTACATAGGCTATGATTCAGTGTCAACACTTGCAGAAGAAATCAGAAACCCTTCAAGAAATCTCCCAGTGGGCATCGTGGGGTCTGTTCTTGTTGTCTCAGCCCTATATTGTCTTATGGCATTAGCCTTGTGTCTCATGGCTCCGTACAATGAGATATCAGGTAGAGGTTCATTTGCAATGGTATTTCAAAACATGGGATGGAAGTGGGCAAGCAATGTTGTTGGAGTGGGTGCAAGCTTGGGAATAGTGGCATCCCTTTTGGTTGCCATGCTTGGCCAGGCTCGATACCTCTGTGTCATTGCAAGAGCCAGGCTTGTCCCTGTTTGGTTTGCCAAGGTTCATCCTTCAACTGGCACTCCCCTGAATGCTACTCTTTTCTTGGGGTTATGCACAGCATCAATAGCCCTCTTCACAGACCTTGAGATAGTCCTGGAGATAATATCCATAGGCACACTCCTTGTATTCTACTTGGTAGCAAATGCACTTATATACAGACGTTATGCAATTATGAGCAGCAACCCTCCATTGCAAATCCTCTTGTTTCTTTTCCTCCTTACAGCCACCTCATTGGGTTTCTCTTTATCATGGAAACTTGAGCAACAATACGGGTGGGGCCTTCCGTTATTCGGAGGGTCCTTGATCACCATTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142542.p1 GENE.R_Transcript_142542~~R_Transcript_142542.p1 ORF type:internal len:384 (+),score=53.54,AA_permease_2|PF13520.2|6.2e-36,AA_permease|PF00324.17|2.3e-16 R_Transcript_142542:1-1149(+)
LALRKKVDKTQLKYELSLIVLSSEKRHFASTGEFVGYFAGSNILMEYVLSNAAVARSFTEYLSGTFGVQDPNSWRVEVHEFVKGYNMLDFPAVALILLLTLFLCHSTKESSILNLTMTIFHVVFFGFIIIVGFWKGNPKNLVSSPGGLAPFGIKGVLDGAAIVYFSYIGYDSVSTLAEEIRNPSRNLPVGIVGSVLVVSALYCLMALALCLMAPYNEISGRGSFAMVFQNMGWKWASNVVGVGASLGIVASLLVAMLGQARYLCVIARARLVPVWFAKVHPSTGTPLNATLFLGLCTASIALFTDLEIVLEIISIGTLLVFYLVANALIYRRYAIMSSNPPLQILLFLFLLTATSLGFSLSWKLEQQYGWGLPLFGGSLITIT

Click here to download the sequence:
Link to NCBI Protein BLAST