Transcript Information: R_Transcript_142609.p1


Annotated TAIR IDAT4G20770.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11130762-11133086 | Reverse length=774
E-Value1.1E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81018364550971
Replicate 20.16446188315638
Replicate 30.35885228610161
Condition 2: 8 Hour
Replicate 10.47948821698261
Replicate 20.35030102101074
Replicate 30.94786478435441
Condition 3: 24 Hour
Replicate 10.59942055424815
Replicate 20.54706255733808
Replicate 30.71435067515983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142609.p1 GENE.R_Transcript_142609~~R_Transcript_142609.p1 ORF type:complete len:766 (+),score=111.45,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|6.4,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|0.0098,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|3.4e+02,PPR|PF01535.16|0.62,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.0009,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.0017,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00019,PPR|PF01535.16|81,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00043,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00024,PPR|PF01535.16|0.22,PPR_1|PF12854.3|55,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|17,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|9.3,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|2.3e+03,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|22,PPR_3|PF13812.2|53,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.3,TPR_17|PF13431.2|4.2e-05,TPR_19|PF14559.2|3.1e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|0.0068 R_Transcript_142609:95-2392(+)
ATGTGGAAACAAACGGGCGAACAAATAGCAAATTTGTTGGAACTTTGCATAACCCACAAATCCCATAAAGCAGGGAAGCTTCTCCATGCTTATATCCTTCGTCGCACAGCCCTTTCCTCTCAAACCTTTCTAGCAAACCGTCTCATCGACTTATACTCCAAATGCTACAACCTCGATTATGCCCACCACCTGTTCGATGGAATGCCTGAACGAGATGTTTTTTCTTGGAACGCTATGCTCAGCGCGCTATGTGCTGCCAAAAGATGGGATTATGCACACCAACTGTTCATTGAAATGCCTGTACGAAATGTCGTGTCTTGGAATAATATGATAAGTGGGTCTGTGAAGTGTGGTGCTTATGCTAAAGCACTAGACTTGTGTATTTCAATGATTTCACAAGGTTTAGTGCCTACCCATTTCACTATGGCTAGCATTTTTAGTGCTTGTGGTGTCTTGTTGGAGCTTCAGTTTGGTAGGCTGTGTCATGGTCTTGCTATCAAAGTTGGGGTTGATAAAAATATCTTTGTAGGCAATGGACTTCTTACTATGTATGCAAAGTGTAGATGTATGAGTGATGCTATTCGCGTCTTTGAGGATTTGCCCGAGCCTAATGAGGTGTCTTTCACCGCGTTAATGGGTGGTTTTTCGGGGACTGAGAGAGTCGAGGAAGCGTTGGGAGTGTTTAGGTCGATGCACAGGATGGGAGTATGTATAGATGGCATGTCATTGTCCAGCGTTGTTGGTGTTTGTACCCGAGGGCGTGATCATAGTTTGTCATGTAGAATGCAGGGCAGATTAGTACATGCTCTTTCGGTGAAACTTGGGTTTGACAAAGATTCTCATTTGCAGAATTCATTGCTTGACATGTATGTCAAGAATGGTGACATGGGTAGTGCCGAAATAATCTTTAGGTATATGCCTGAATTGGGTGTTGTTTCTTTTAACATCATGATTGCCGGGTATGGCCAAATGTACAAGTGTGACAAAGCACTAGAGTTCATGGAAAGAATGGAGTTTTGCGGTTATCAGCCAGACGAGGTCACTTTTATCAATATACTAGGAGCTTTTGTCAACTCTGGGAATATTGTAGTTGCGCGTCAAATGTTTGACAAAAAGGTATGTGCAAGTTTGACCTCATGGAATGCGATGCTTACAGGGTATTCACAGATTGGAAAGCATGATGAAGCCATAATGCTTTTCAGGGAAATGGAGTTTAGTGGCATAGAACCAGATAGGACTACTCTGGCTGTTGTTCTTGGTTCTTGTGCTGAGATTGGGTTTCTAGAATGTGGAAAACAAGTTCATGCTGTCTCACTAAAGAGAACTATTAATGATGACATGTATGTTGGTAGTGGACTAATCAATTTGTATTCTAAGTTTGGCAAAATGACAAAAGCCAAGTCTATTTTTGATGGACTTCCTGCAGTAGATATCGTCTGTTGGAATTCTATGATAGCGGGATTTTCTCTTAATTCTTTGGAGAGGGAGGTGTTTGATTTTTTTAACTCCATGAGAAGAAGTAATATGTCTCCCACTCAGTTTACTTATGCAACTATGTTGAGTTGCTGTGCCAAACAGTCCTTCTCATCTCAAGGAAAACAAATCCATGCTCAGACATTGAAACATGGGTTCATGTATGACATATATGTAGGGAGTGCTCTGATTGACATGTATTGCAAGTGCGGTTATGTTGCAGGAGCAAGGGAACTTTTTGATGCAATGCCAGTAAAAAATGCTGTTATCTGGAATGAGATGATACATGGATATGCACAGAGTGGGTCTGGAAATGAGGCCATGCATCTCTACAATTGTATGTTTACGGCTGGTGAAGAGCCAGATGATGTGACCTTTACAGCTATCTTAACTGCTTGTAGCCATTCTGGACTGGTTGATGAAGGGGTTAAAATATTTGAAGCAATGCAAATAGAACATGAAGTTGAACCCCTGTTGGACCATTACACCTGTATTATTGATGCCCTTGGTAGAGCTGGTAGGTTACATGAAGCAGAATTGCTTATAAAAAGAATGCCATGTAAAGATGATCCTATTGCATGGGAGGCTTTGATTAGCTCTTGTAGAGTCTACAGTGATGCTCTCGTAGCACAACGAGCTGCTGAAAAACTAATCTCATTGAATCCAAGTTCTTCAACACCTTATGTGCTTCTGGCCAACGTCTATTCTTCCCTGGGAAGGTGGGAAGAAGCAAGGGCAGTTAGAGATCTCATGACTGATAAAAATGTTGTTAAGGATGGAGGTTACAGCTGGACAGATACTATGATTGTAAGTGAAATATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142609.p1 GENE.R_Transcript_142609~~R_Transcript_142609.p1 ORF type:complete len:766 (+),score=111.45,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|6.4,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|0.0098,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|3.4e+02,PPR|PF01535.16|0.62,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.0009,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.0017,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00019,PPR|PF01535.16|81,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00043,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00024,PPR|PF01535.16|0.22,PPR_1|PF12854.3|55,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|17,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|9.3,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|2.3e+03,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|22,PPR_3|PF13812.2|53,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.3,TPR_17|PF13431.2|4.2e-05,TPR_19|PF14559.2|3.1e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|0.0068 R_Transcript_142609:95-2392(+)
MWKQTGEQIANLLELCITHKSHKAGKLLHAYILRRTALSSQTFLANRLIDLYSKCYNLDYAHHLFDGMPERDVFSWNAMLSALCAAKRWDYAHQLFIEMPVRNVVSWNNMISGSVKCGAYAKALDLCISMISQGLVPTHFTMASIFSACGVLLELQFGRLCHGLAIKVGVDKNIFVGNGLLTMYAKCRCMSDAIRVFEDLPEPNEVSFTALMGGFSGTERVEEALGVFRSMHRMGVCIDGMSLSSVVGVCTRGRDHSLSCRMQGRLVHALSVKLGFDKDSHLQNSLLDMYVKNGDMGSAEIIFRYMPELGVVSFNIMIAGYGQMYKCDKALEFMERMEFCGYQPDEVTFINILGAFVNSGNIVVARQMFDKKVCASLTSWNAMLTGYSQIGKHDEAIMLFREMEFSGIEPDRTTLAVVLGSCAEIGFLECGKQVHAVSLKRTINDDMYVGSGLINLYSKFGKMTKAKSIFDGLPAVDIVCWNSMIAGFSLNSLEREVFDFFNSMRRSNMSPTQFTYATMLSCCAKQSFSSQGKQIHAQTLKHGFMYDIYVGSALIDMYCKCGYVAGARELFDAMPVKNAVIWNEMIHGYAQSGSGNEAMHLYNCMFTAGEEPDDVTFTAILTACSHSGLVDEGVKIFEAMQIEHEVEPLLDHYTCIIDALGRAGRLHEAELLIKRMPCKDDPIAWEALISSCRVYSDALVAQRAAEKLISLNPSSSTPYVLLANVYSSLGRWEEARAVRDLMTDKNVVKDGGYSWTDTMIVSEIS*

Click here to download the sequence:
Link to NCBI Protein BLAST