Transcript Information: R_Transcript_142624.p1


Annotated TAIR IDAT5G19190.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6457349-6457918 | Forward length=154
E-Value1.2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0847534088145
Replicate 23.7493393600532
Replicate 34.7449670734887
Condition 2: 8 Hour
Replicate 11.5740913180372
Replicate 21.9166470149588
Replicate 32.9820503162064
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 21.7329131985454
Replicate 30.93804448658131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142624.p1 GENE.R_Transcript_142624~~R_Transcript_142624.p1 ORF type:complete len:140 (+),score=29.49 R_Transcript_142624:174-593(+)
ATGGCTATGGAAGTTGCTATTGAAGATGATCTTTTTCTTGCTGATCTAAACAGGCAAATCTCTCTTTTGATTGACGACGATGACGACAATGATGATCCTGTTTCTAATCTCCCTTCTGTTTCTCCTATGCAGGGCTTTTCTCAATCACTAGCTCATCCACCAATGTTGCCATCACAATATTTGTTCCAAGAAAATTGTAGATCAAGAGAAATTAGCAAAGGAACAGGAGTGTTCATTCCTCAATCGTCACAACCAAGGAGAAGATACAAGCAACAAGGAAAGCGTTCAGCATCTTACAGCGCCAAATCTACCAACAACAAACAGCTTGACAATTCTAAAGGTCGGTCCATTAATAATGGGCCCAATAATCACATCAATTTCTCCCCTGCTTATTATGCCACCGATATCAATAGGTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142624.p1 GENE.R_Transcript_142624~~R_Transcript_142624.p1 ORF type:complete len:140 (+),score=29.49 R_Transcript_142624:174-593(+)
MAMEVAIEDDLFLADLNRQISLLIDDDDDNDDPVSNLPSVSPMQGFSQSLAHPPMLPSQYLFQENCRSREISKGTGVFIPQSSQPRRRYKQQGKRSASYSAKSTNNKQLDNSKGRSINNGPNNHINFSPAYYATDINRY*

Click here to download the sequence:
Link to NCBI Protein BLAST