Transcript Information: R_Transcript_142711.p1


Annotated TAIR IDAT4G28450.1
Annotated Gene Namenucleotide binding;protein binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14061724-14064582 | Reverse length=452
E-Value7.1E-262
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.967301863553
Replicate 220.810902620128
Replicate 325.333941579851
Condition 2: 8 Hour
Replicate 124.756128357259
Replicate 227.790676548758
Replicate 330.052335464217
Condition 3: 24 Hour
Replicate 134.107294181556
Replicate 229.796508699853
Replicate 334.643453113698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142711.p1 GENE.R_Transcript_142711~~R_Transcript_142711.p1 ORF type:complete len:453 (+),score=91.43,Sof1|PF04158.10|7.2e-27,WD40|PF00400.28|0.0054,WD40|PF00400.28|3.7e-06,WD40|PF00400.28|4.6,WD40|PF00400.28|0.0043,WD40|PF00400.28|0.00023 R_Transcript_142711:581-1939(+)
ATGAAGGTCAAAGTAATTTCTCGTGTTACAGAAGATTATACTCGTGAACGAAGCAATGACCTTCAGAAAGTGAGTCGCAATTATGATCCCATTCTTCGTCCTCAAGAGAAGGCTGTCGAGTATGTTCGAGCTGTTAATGCTGCTAAATTGGATAAGATATTTGCGAGGCCTTTTATTGGAGCAATGGATGGACATATTGATGCTATTTCTTGCATGGCCAAAAACCCTAAATACTTGAAAGGATTATTTTCGGGGTCAATGGACGGAGATATCCGTCTTTGGGACATTGCTTCCAGGCGTACAGTTTGTCATTTTCCTGGTCATCAAGGTCCCGTGAAGGGTTTGGCAGCATCAACAGATGGGCACATTCTTGTATCATGTGGACTTGATTGCACTGTCAAGCTATGGAGAGTTCCAGATCCTTTCAGCATGGAATCAGATGATACTTCGGATGAATCTTCAGTGCCTTTGGCAGACTACATCGGGAAAAATGCATACAAAGGAGCTGATCACCAGTGGGGTGGGAATCTTTTTGCTACAGCTGGTGCTCAGTTGGAAATTTGGGATCATAACAGGTCGCAGCCAGTAAACACTTTTGAATGGGGAGTAGACACTGTTGTATCCGTTCGTTTCAACCCTGGGGAACCCAATTTGCTGGCTACATCGGGCAGTGACCGCAGTATTGCAATCTATGATCTTCGCTTGTCTACCCCTGCGAGGAAAATCATCATGCAGACAAAAACAATTTCAATTTCTTGGAATCCGATGGAGCCATTGAATTTCACAGCAGCAAATGAAGATTGCAACTGCTATAGTTATGATGTTAGAAAATTGAATGAAGCTAAGTGTGTTCATCAAGATCACGTCTCTGCAGTGATGGACATTGATTACTCTCCCACAGGTCGGGAATTTGCTACAGGATCTTATGATAGAACAGTAAGGATATTCCCATATAACGGTGGTCACAGCCGGGAAATCTACCATACAAAGAGAATGCAGAGAGTCTTCTGTGTCAAATTCAGTTGTGATGGTTCATATGTTATTTCTGGAAGTGATGACACAAATGTGCGGCTCTGGAAAGCTAAACCATCTGAACAACTAGGAGTTCTTCTTCGTAGGGAGGAAAAAAAACATCAGTATAATGAGGCTGTAAAGAACCGTTACAAGCACCTTCCAGAAGTGAAGCGTATTGTTAGGCACAGGCACTTACCTAAAGCTGTGTACAAGGCTCAAAATCTCAGACGCACAATGACAGAAGCAGAGAGGAAGAGAAAGGAGAAAAGAAAAGCGCATAGTGGCCCATCGAGTGTTCAAGAGGAACCACTTCGCAAGAGAAGAATCATTAAAGAGATTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142711.p1 GENE.R_Transcript_142711~~R_Transcript_142711.p1 ORF type:complete len:453 (+),score=91.43,Sof1|PF04158.10|7.2e-27,WD40|PF00400.28|0.0054,WD40|PF00400.28|3.7e-06,WD40|PF00400.28|4.6,WD40|PF00400.28|0.0043,WD40|PF00400.28|0.00023 R_Transcript_142711:581-1939(+)
MKVKVISRVTEDYTRERSNDLQKVSRNYDPILRPQEKAVEYVRAVNAAKLDKIFARPFIGAMDGHIDAISCMAKNPKYLKGLFSGSMDGDIRLWDIASRRTVCHFPGHQGPVKGLAASTDGHILVSCGLDCTVKLWRVPDPFSMESDDTSDESSVPLADYIGKNAYKGADHQWGGNLFATAGAQLEIWDHNRSQPVNTFEWGVDTVVSVRFNPGEPNLLATSGSDRSIAIYDLRLSTPARKIIMQTKTISISWNPMEPLNFTAANEDCNCYSYDVRKLNEAKCVHQDHVSAVMDIDYSPTGREFATGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYVISGSDDTNVRLWKAKPSEQLGVLLRREEKKHQYNEAVKNRYKHLPEVKRIVRHRHLPKAVYKAQNLRRTMTEAERKRKEKRKAHSGPSSVQEEPLRKRRIIKEIE*

Click here to download the sequence:
Link to NCBI Protein BLAST