Transcript Information: R_Transcript_142828.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0097382655802
Replicate 21.2061704494469
Replicate 31.0234925308919
Condition 2: 8 Hour
Replicate 10.6772686049238
Replicate 20.61849247645832
Replicate 30.65654761818421
Condition 3: 24 Hour
Replicate 11.2211599589204
Replicate 21.0792999031559
Replicate 30.88482210436393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142828.p1 GENE.R_Transcript_142828~~R_Transcript_142828.p1 ORF type:5prime_partial len:470 (+),score=90.80,HTH_Tnp_Tc3_2|PF01498.14|1.6e-06,DDE_3|PF13358.2|3.9e+02,DDE_3|PF13358.2|9.8e-05 R_Transcript_142828:2-1411(+)
AAAGCTGGAGAACCAATCTGTGTACAGAGCAGACTAAAGGGGAATGTGGGTAGAAAGAGAATTCAAGTTGACTTGCAAACCATAAAAGATATTCCACTGCACAGTAGGAAGACACAAAAGCAACTGGCTTATGCATTGGGTGTATCACAGTCAACTATACACAGAATGTTGAGGAGGAAAAAAATCAGAAGACACTCTAATGCCATCAAGCCCCTTCTATCAGAGGCTGGAAAAATCAAGAGGTTAGAATATTGTCTTAACCATATTGTACCTGATTCTATTCCCCATAATCCAACCTTTGATGACATGCATTTATACATTCATATTGATGAAAAGTGGTTTCAAACAACTAAAGAAACTGAACACTACTATACACATCCAGATGAAGATGACAAGTATAGAGCAACACAGTCAAAAACTCATTTGCCAAAATCCATGTTTCTAGGGGTGGTTGGTAAACCTAGGTTTGGACCAAATGGGGAGGTTATTTGGGATGGGAAGGTAGGAATATATGCATTCATTACATATGAAGCAGCTATAAGGGCAAGCAAGAATAGGCCAGCAGGAACCATTGTAATTAAACCAATTACATGTGTAACAAGAGAGGTGGTTAGGGATATGCTAATTAATCAAGTTCTACCAGACCTCAAGCAGAGATGGCCAGATTCTGTCAACAAAAGAATCATAATGCAACAAGACAATGCCAAACCTCATCTTCATGTGAATGATACAAATTTTGTACAAGCTGCCACACAAGATGGATGGAATATACAATTAGTTTATCAACCTCCTAATAGCCCTGATTTGAATATCCTAGACCTTGGTTTCTTTAGAGCTATTGATTCTTTAAAAGATGAAAAATCATCTAGAAACATCACAGAACTAATAGGGCATGTGAAAGCAGCATTTGAAGAACTTGATGCAATGACATTGAACAAGGTCTGGCTTACACATCAGTTGGTCATGGAACAAATTTTACTTTGTCATGGTTCAAACAAATTCAAGCTGCCACATATTGGGAAAGATAGGATAATTAGAGATGGGATGTTACCTAAGGTCATTTCTATTAGTCCAGACCTTTATGAGGCATCAGTGGGACATTTGCAAACAGCAAAAGCAATACTGGAAGCAAGCAGACTTGTGTCAAGAAGGAACAGAGCAAGGGAGAGTGGAAGGGTTCAACAACAATTAGAATCACAACAGGTAGAAAGTGATTCCCAGCAGCAAATACAAACAGAAACACAACAGGAAGAACCAACATCACAACAGGAGTCAGAACCAGAATCACAGTCACAAACAATGACAAACCCAGATAGAGGCAGAACCACAATCACAGGCATCACAAGCACAAGAATTCAGCCACTGGAGTTCATAAATGAAGATGTTACAACATCTTCATCAATGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142828.p1 GENE.R_Transcript_142828~~R_Transcript_142828.p1 ORF type:5prime_partial len:470 (+),score=90.80,HTH_Tnp_Tc3_2|PF01498.14|1.6e-06,DDE_3|PF13358.2|3.9e+02,DDE_3|PF13358.2|9.8e-05 R_Transcript_142828:2-1411(+)
KAGEPICVQSRLKGNVGRKRIQVDLQTIKDIPLHSRKTQKQLAYALGVSQSTIHRMLRRKKIRRHSNAIKPLLSEAGKIKRLEYCLNHIVPDSIPHNPTFDDMHLYIHIDEKWFQTTKETEHYYTHPDEDDKYRATQSKTHLPKSMFLGVVGKPRFGPNGEVIWDGKVGIYAFITYEAAIRASKNRPAGTIVIKPITCVTREVVRDMLINQVLPDLKQRWPDSVNKRIIMQQDNAKPHLHVNDTNFVQAATQDGWNIQLVYQPPNSPDLNILDLGFFRAIDSLKDEKSSRNITELIGHVKAAFEELDAMTLNKVWLTHQLVMEQILLCHGSNKFKLPHIGKDRIIRDGMLPKVISISPDLYEASVGHLQTAKAILEASRLVSRRNRARESGRVQQQLESQQVESDSQQQIQTETQQEEPTSQQESEPESQSQTMTNPDRGRTTITGITSTRIQPLEFINEDVTTSSSMN*

Click here to download the sequence:
Link to NCBI Protein BLAST