Transcript Information: R_Transcript_142949.p1


Annotated TAIR IDAT5G52030.2
Annotated Gene NameTraB family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21128291-21130034 | Forward length=402
E-Value5.5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6192142782412
Replicate 21.4392625285366
Replicate 30.83129289663456
Condition 2: 8 Hour
Replicate 13.7518664032069
Replicate 23.1557696146835
Replicate 32.9276791323205
Condition 3: 24 Hour
Replicate 11.6662924600753
Replicate 21.5118524239509
Replicate 31.3238531060623


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_142949.p1 GENE.R_Transcript_142949~~R_Transcript_142949.p1 ORF type:complete len:248 (+),score=36.20,TraB|PF01963.13|2.4e-12 R_Transcript_142949:536-1279(+)
ATGTACACTTCTAGCACCAATCAGCCTGAACAACAACAACTAAGGTCAAGTATGTTCTCGTTAAGTGGTTCTGAGTTTTTTGGTGCTGTTGGCCGTAGCATTAATTTGGGGGGACAAACTGCTCTAGCATTAAGGCTATTGTTGGCGATTTTCTCATCCAAGATTTCATCGGATGTTGATCGTCCATTTGGAGATGAGTTTCGTGCTGCAAGGATAGTATCTGAAGAAATCGGAGCTCAGATAGTATTGGGAGATCGGCCCATTGAAATCACTCTTGAGAGGGCTTGGAACTCACTGAATTGGACTGAAAAACTGAGCCTATTGGGTTCAGTTCTCCGTGGGATCACTTCTTCATCGGATTCATCCAGAGACGATGTCAAGGAGTCAGGTACAGATGATAATCCATACCAGCTTTATGAGAAACTCAGCTTCTCATATCCTTCCCTGTTACAGCCGCTCATACATGAGCGTGACACGTACCTAGCATGGTCCCTGAAGCGAAGCAAAGCTGTGAATAATTGTAAGAGAGTGGTGGGAGTGATTGGGAAGGGCCACTTGAATGGAGTGATATTTGCACTTGTCTCAGATTTAGGGGACCTGCGGTTTCGAGACCTAGCAGGAAAGAGATCTGATGCTGGTAATCCGAACGGTTGGATCAATAAATTTCTTCTAGATTTGGCTAGGGATACCTTGATAGGAGTTCTGTTATGGGCGTTATATGAACAACTTAAGTCCGGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_142949.p1 GENE.R_Transcript_142949~~R_Transcript_142949.p1 ORF type:complete len:248 (+),score=36.20,TraB|PF01963.13|2.4e-12 R_Transcript_142949:536-1279(+)
MYTSSTNQPEQQQLRSSMFSLSGSEFFGAVGRSINLGGQTALALRLLLAIFSSKISSDVDRPFGDEFRAARIVSEEIGAQIVLGDRPIEITLERAWNSLNWTEKLSLLGSVLRGITSSSDSSRDDVKESGTDDNPYQLYEKLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNNCKRVVGVIGKGHLNGVIFALVSDLGDLRFRDLAGKRSDAGNPNGWINKFLLDLARDTLIGVLLWALYEQLKSGF*

Click here to download the sequence:
Link to NCBI Protein BLAST