Transcript Information: R_Transcript_143179.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.76392082453
Replicate 217.872883825444
Replicate 313.914423250555
Condition 2: 8 Hour
Replicate 123.777596126457
Replicate 230.67691227799
Replicate 335.553154686213
Condition 3: 24 Hour
Replicate 124.760279695995
Replicate 228.070329497098
Replicate 329.937315088277


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143179.p1 GENE.R_Transcript_143179~~R_Transcript_143179.p1 ORF type:complete len:242 (+),score=38.08,DUF761|PF05553.7|2.2e-07 R_Transcript_143179:65-727(+)
ATGGAAATAGAGCCAACAAGCAGTGGTCAAGTTATAGCAAAGAAGGTATGGAGTATTCTAAGAATAATGTTGATGATGGTTAAGAAAGGCATTTCCAAGAGCAAGTTAATATTGGACCTTAACTTGCTCTTGAAGAGAGGCAATCAATTGGCTGGTAAAGCCATCAATGGGCTCATCATCCACCACAACTCCCTCATTTGCAAGCCCAACCACCCTAACCACCACTTCATCAGTCCCAATGAGTATGAATTCAGCTGTAGTAACAGCCCTGCTGTGGGCCCCATCCACCAATACCTCATGACCATGGCCCAATACAAGAAGCCTGTCTTGGGCCGGCCCAAACCCCATCGCAACCGCTACTCCCACCCTCTCGAGGACCCCAACACGGTTGCTGCCGTCCAACGGGTCCTCGAGATGATGAACCCTGAGGTCCCACCAGCTGTCTCACCCTTAAGCTTGTCTGGGTTCGGAAAAAGCCCAATGGTCAGGCAGCTTAGGGTGACAGACTCCCCTTTCCCATTAAAACATGGGAAAGGAAACACGGAAGAAGATGAGGAAGATGTCAAGGTTAATAATGCTGCTGAGGAGTTCATTAAGAAGTTTTATAACAATTTGAAGATGCAAAAATCTTTGGAGTCGCCTTGCCATATGTGGGCTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143179.p1 GENE.R_Transcript_143179~~R_Transcript_143179.p1 ORF type:complete len:242 (+),score=38.08,DUF761|PF05553.7|2.2e-07 R_Transcript_143179:65-727(+)
MEIEPTSSGQVIAKKVWSILRIMLMMVKKGISKSKLILDLNLLLKRGNQLAGKAINGLIIHHNSLICKPNHPNHHFISPNEYEFSCSNSPAVGPIHQYLMTMAQYKKPVLGRPKPHRNRYSHPLEDPNTVAAVQRVLEMMNPEVPPAVSPLSLSGFGKSPMVRQLRVTDSPFPLKHGKGNTEEDEEDVKVNNAAEEFIKKFYNNLKMQKSLESPCHMWAS*

Click here to download the sequence:
Link to NCBI Protein BLAST