Transcript Information: R_Transcript_143214.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7696332406484
Replicate 23.4233098504834
Replicate 32.7388490604095
Condition 2: 8 Hour
Replicate 13.9922605892248
Replicate 22.4305306349115
Replicate 32.9595017315848
Condition 3: 24 Hour
Replicate 12.9944965949179
Replicate 21.9178485991806
Replicate 33.5686475032985


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143214.p1 GENE.R_Transcript_143214~~R_Transcript_143214.p1 ORF type:5prime_partial len:92 (+),score=-0.75,AMP-binding|PF00501.24|8.3e-07,AMP-binding|PF00501.24|1.3e+03 R_Transcript_143214:3-278(+)
CATACCGGTGATGTTGGTTATTTTGATGAGGAGGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGTACTTTTCTAAACCTTCTTCTTTCACAAAAATATCTGTACATGTGTCTAATCATAAACTTAATCCAGTATTATTTCATTACTCGTCTGATCTTATGCTTCCATTTGGTTTATTGCTCATATGTTTGTTTTTTGTTGTTTAGTGTTGGTATGCGAAATTTATATGGTGCACCATGCTCCCAATGGTATTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143214.p1 GENE.R_Transcript_143214~~R_Transcript_143214.p1 ORF type:5prime_partial len:92 (+),score=-0.75,AMP-binding|PF00501.24|8.3e-07,AMP-binding|PF00501.24|1.3e+03 R_Transcript_143214:3-278(+)
HTGDVGYFDEEGYLHLVGRIKELINRGGTFLNLLLSQKYLYMCLIINLIQYYFITRLILCFHLVYCSYVCFLLFSVGMRNLYGAPCSQWYY*

Click here to download the sequence:
Link to NCBI Protein BLAST