Transcript Information: R_Transcript_143227.p2


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59359222616971
Replicate 20.1707016294008
Replicate 30
Condition 2: 8 Hour
Replicate 10.19907207274183
Replicate 20
Replicate 30.29514814016889
Condition 3: 24 Hour
Replicate 10.18664883924963
Replicate 20.17931104789087
Replicate 30.71179527437065


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143227.p2 GENE.R_Transcript_143227~~R_Transcript_143227.p2 ORF type:complete len:123 (+),score=26.75,PPR_2|PF13041.2|5e+02,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|76 R_Transcript_143227:654-1022(+)
ATGGGTGCTCTAAAGGCTAATGCTTTCCTTGCAAATAAACTGGTAGTGTCCTATGCAAGGAATACAGAGTTGTCGAATGATGCCCAGAAGCTGGTCGATAGAATTCCTAAGAGAACAGTATCCGCTTATGCTGCTATAATAGGCTCACTTTGTCGTTTGGAGAAGTGGGTTGATCTTATTTCCGTGTTCCGGATGATGGTGAATGATGGAATGTTACCTGACAGATATCTTGTACCAACTATTCTGAAAGCTGCTTCTGAGATGAGATTGAGGGAAATGGGTAAAATGTTTCATGGGTATGTCATAAGAAGGGGGATTCAGGAGGATGTCTTTGTTGGGAATGCTCTTATTGACATGTATGCAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143227.p2 GENE.R_Transcript_143227~~R_Transcript_143227.p2 ORF type:complete len:123 (+),score=26.75,PPR_2|PF13041.2|5e+02,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|76 R_Transcript_143227:654-1022(+)
MGALKANAFLANKLVVSYARNTELSNDAQKLVDRIPKRTVSAYAAIIGSLCRLEKWVDLISVFRMMVNDGMLPDRYLVPTILKAASEMRLREMGKMFHGYVIRRGIQEDVFVGNALIDMYAK*

Click here to download the sequence:
Link to NCBI Protein BLAST