Transcript Information: R_Transcript_143229.p2


Annotated TAIR IDAT1G20230.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7009570-7011852 | Forward length=760
E-Value1E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2219555450858
Replicate 21.0542075522828
Replicate 30.67090863252329
Condition 2: 8 Hour
Replicate 11.2294158132508
Replicate 20.93560175067722
Replicate 31.6708595550147
Condition 3: 24 Hour
Replicate 11.344808791581
Replicate 21.3842212692831
Replicate 31.5568660237542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143229.p2 GENE.R_Transcript_143229~~R_Transcript_143229.p2 ORF type:complete len:239 (+),score=40.24,DYW_deaminase|PF14432.2|5.9e-17 R_Transcript_143229:2638-3354(+)
ATGGAGTTAACCCAAAGTTTGGAACACTACACTTGTATGGTAGGAATCATGGGAACTGCTGGTTTGCTTGACGAGGCTTTAGAGTTTATCCAGAAAATGCCCTTTGCCCCTGATGCCTGTATATGGTCTACTCTTCTTCGTTCTTGTAGAACCCATTCAAATCCAGAGATAGGAGAGCGAGCAGCAGCAGCTCTCTTTGAACTCGAACCAAACAATGCTTCTCACTATATGATTCTCTGCAACATCTATGCATCTTCAGGGATGTGGGATTCATCAAAGAGCTTGAGAAGTTTCCTCAAGGAATATCAGTCAGTCTCTGTAACGGAGCGCAGTTGTATAAACATAGGTTCAACAGTACATTCATTTAAGGGAGGAACTAATTCCTCACCATTATTGAGCAACATCATGGTTACGTGGCATAAGTTGGCTGATGAAATGAGGGGTGCAGGGCACTTTCCCCAGGATCCTGTGTTTGGAGATGAGAAGGATTTGGATCCATCTTCATGTTTGCACACAGAAAAGCTGGCTATATGCCTAGGGATAAACTGTTTGAGTGCTGTGCCAATTCGTGTCTCAAAGAATCTGAGGATGTGCATCGATTGTCACACATCAGCTAAGCTCATATCCAAGATCGTTGGACGGGAAATATATGTGAAGGATGCCAGTTTCCATCACCAAATGAAGGATGGCATATGTAGTTGCCAGGACAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143229.p2 GENE.R_Transcript_143229~~R_Transcript_143229.p2 ORF type:complete len:239 (+),score=40.24,DYW_deaminase|PF14432.2|5.9e-17 R_Transcript_143229:2638-3354(+)
MELTQSLEHYTCMVGIMGTAGLLDEALEFIQKMPFAPDACIWSTLLRSCRTHSNPEIGERAAAALFELEPNNASHYMILCNIYASSGMWDSSKSLRSFLKEYQSVSVTERSCINIGSTVHSFKGGTNSSPLLSNIMVTWHKLADEMRGAGHFPQDPVFGDEKDLDPSSCLHTEKLAICLGINCLSAVPIRVSKNLRMCIDCHTSAKLISKIVGREIYVKDASFHHQMKDGICSCQDRW*

Click here to download the sequence:
Link to NCBI Protein BLAST