Transcript Information: R_Transcript_143259.p1


Annotated TAIR IDAT1G44000.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16708201-16709521 | Reverse length=260
E-Value6.8E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2627150197912
Replicate 23.7548128481701
Replicate 33.0096443556989
Condition 2: 8 Hour
Replicate 12.1447472946492
Replicate 22.0402264453637
Replicate 31.7224156063141
Condition 3: 24 Hour
Replicate 13.1839294695356
Replicate 22.7367839499257
Replicate 33.9941066946893


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143259.p1 GENE.R_Transcript_143259~~R_Transcript_143259.p1 ORF type:complete len:274 (+),score=55.19,Staygreen|PF12638.3|1.3e-54 R_Transcript_143259:201-1022(+)
ATGGATGAAGAAGAGAAGAGAGAAAATATTGATGTGCTCTGGAAATTAATGGCTAGTAATAGTGCTGCTTGTGCTTTCTCAATAACATCTTCACACATACACAGGCATTATATTACTACTACCACTTTGTTGTTTTCTAGGAATACTCTAAGATCTCCTGTTCTTCTCTCTTGTGCTACCCAAGCCAGAGCTCCCTACAAGAATGCTTTCATTTCTGAGGCTGTGAGGCTTTTGGGTCCGCCAGCAAGATTTGACGCATCCAAGTTGACAGTAGATTTCATGGGACAAGAGGTTGACAACAAGTACTCCAGAGTTTTGCCAAGAATCTACATTCTCTCACATTGTGATTTCACTGCTGATTTAACCTTAACCATCTCCAATATCATCAATATTGACCAGCTGCGAGGATGGTACAGTAAGGATGATGTAGTTGCAGAGTGGAAGGAACTGAAAGGGAAAATGTGCTTGGTTGTTCACTGCTTTCTTAGCGGCCCCAATAATCTCTTCGTTGATCTGGCTGCAGAGTTCCGATATCACATTTTCTCCAAGGAGCTACACTTGGTGCTCCAAGCTGTTCAATATGGGGATTCAACCCTGTTTAAGCAACACCCAGAGCTTATGGATGCTGTTGTTTGGGTTTATTTCCACTCAAGCTCACCCAAATACAATTGCATTGAGTGTTGGGGGCCACTTAAGGAAGCTGCACAAAAAGGGAACCAAATCCGCGGCTTGTTAACTGCAAACAACAAGGATGCTCTGCCTGCACAGAAATTGCCAAGTCCCAAATCCTTTTTCCAAACTCTATTTACTTTTCTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143259.p1 GENE.R_Transcript_143259~~R_Transcript_143259.p1 ORF type:complete len:274 (+),score=55.19,Staygreen|PF12638.3|1.3e-54 R_Transcript_143259:201-1022(+)
MDEEEKRENIDVLWKLMASNSAACAFSITSSHIHRHYITTTTLLFSRNTLRSPVLLSCATQARAPYKNAFISEAVRLLGPPARFDASKLTVDFMGQEVDNKYSRVLPRIYILSHCDFTADLTLTISNIINIDQLRGWYSKDDVVAEWKELKGKMCLVVHCFLSGPNNLFVDLAAEFRYHIFSKELHLVLQAVQYGDSTLFKQHPELMDAVVWVYFHSSSPKYNCIECWGPLKEAAQKGNQIRGLLTANNKDALPAQKLPSPKSFFQTLFTFLL*

Click here to download the sequence:
Link to NCBI Protein BLAST