Transcript Information: R_Transcript_143417.p1


Annotated TAIR IDAT2G28230.1
Annotated Gene NameTATA-binding related factor (TRF) of subunit 20 of Mediator complex
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12037855-12039009 | Reverse length=219
E-Value8.3E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2087010222005
Replicate 26.4312992266138
Replicate 39.6992492524249
Condition 2: 8 Hour
Replicate 110.367888761446
Replicate 212.691311315267
Replicate 310.956377581675
Condition 3: 24 Hour
Replicate 111.995971344206
Replicate 210.133497328103
Replicate 313.507277216689


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143417.p1 GENE.R_Transcript_143417~~R_Transcript_143417.p1 ORF type:complete len:222 (+),score=36.01,Med20|PF08612.7|7.2e-44 R_Transcript_143417:219-884(+)
ATGCCTGTCAAGTGGATTCTGCACTGGCATCCTAATGCTGGTGCTACAGTGAATACTCAGATAATGAATGAAATCTGCCAGTGTGCTGAGAGCTTGAATGGTGTGAAGGAAGGCAGGTGGAAGTCCGTCCTCACGTTCTACAAACCTATTACTCGCGACCAGTCAATGGCAGCAGAGTTCCCTCGTGATTTTCTTGGCCTTTCAATACCAGAGCAGCCGAACAAATACTACTTCATAATTCGTGGACAAAGGATTGTTCTTGAAGCTGATGCTACGATACAGACAATCATGGAGAAGCTGCAATCATACAAGTCCAGGGTGTCCCTTAATTTTGAGGGTACTCAGTACCAACTTGGTGACTTTCAAGTAAGAGTGGGAAAGGTTGCTCCTAGTCACTCTGAAACTATGAGGGGAATAGTAATGGAGGTTGAGTATCTTCCGATTTCTTCAATTGATAAATCCAGGCAAATCCTAGAAGACTTTGTCGATATTTGGAAAGATACTCTTTCAAAGAGGTCGTTACCTGGCCAATTTCTGCACATTGAACCAAATTTTTCAGATTATGGTTTATCAGACCTCTATACGTCTCAACATACAGGGGTTCAGTATGCTACTGTGATGGCTCAATTGATTGCAACAGTACAATCAACACAAGTCAGAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143417.p1 GENE.R_Transcript_143417~~R_Transcript_143417.p1 ORF type:complete len:222 (+),score=36.01,Med20|PF08612.7|7.2e-44 R_Transcript_143417:219-884(+)
MPVKWILHWHPNAGATVNTQIMNEICQCAESLNGVKEGRWKSVLTFYKPITRDQSMAAEFPRDFLGLSIPEQPNKYYFIIRGQRIVLEADATIQTIMEKLQSYKSRVSLNFEGTQYQLGDFQVRVGKVAPSHSETMRGIVMEVEYLPISSIDKSRQILEDFVDIWKDTLSKRSLPGQFLHIEPNFSDYGLSDLYTSQHTGVQYATVMAQLIATVQSTQVRT*

Click here to download the sequence:
Link to NCBI Protein BLAST