Transcript Information: R_Transcript_143419.p1


Annotated TAIR IDAT2G28230.1
Annotated Gene NameTATA-binding related factor (TRF) of subunit 20 of Mediator complex
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12037855-12039009 | Reverse length=219
E-Value3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0127400792015
Replicate 21.8526147426145
Replicate 33.7728744276016
Condition 2: 8 Hour
Replicate 13.7448969919316
Replicate 22.7622265803817
Replicate 37.6877409686345
Condition 3: 24 Hour
Replicate 13.6462399714589
Replicate 23.3731572420883
Replicate 32.3175216727303


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143419.p1 GENE.R_Transcript_143419~~R_Transcript_143419.p1 ORF type:complete len:170 (+),score=23.07,Med20|PF08612.7|2.7e-33 R_Transcript_143419:321-830(+)
ATGCCTGTCAAGTGGATTCTGCACTGGCATCCTAATGCTGGTGCTACAGTGAATACTCAGATAATGAATGAAATCTGCCAGTGTGCTGAGAGCTTGAATGGTGTGAAGGAAGGCAGGTGGAAGTCCGTCCTCACGTTCTACAAACCTATTACTCGCGACCAGTCAATGGCAGCAGAGTTCCCTCGTGATTTTCTTGGCCTTTCAATACCAGAGCAGCCGAACAAATACTACTTCATAATTCGTGGACAAAGGATTGTTCTTGAAGCTGATGCTACGATACAGACAATCATGGAGAAGCTGCAATCATACAAGTCCAGGGTGTCCCTTAATTTTGAGGGTACTCAGTACCAACTTGGTGACTTTCAAGTAAGAGTGGGAAAGGTTGCTCCTAGTCACTCTGAAACTATGAGGGGAATAGTAATGGAGGTACAAGGCTCAAGTCATTATTGTCTAAGTATCTCAGCTTTTCTTATGCTAGACGTGTTGTTATTAGTATGCTCTGAACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143419.p1 GENE.R_Transcript_143419~~R_Transcript_143419.p1 ORF type:complete len:170 (+),score=23.07,Med20|PF08612.7|2.7e-33 R_Transcript_143419:321-830(+)
MPVKWILHWHPNAGATVNTQIMNEICQCAESLNGVKEGRWKSVLTFYKPITRDQSMAAEFPRDFLGLSIPEQPNKYYFIIRGQRIVLEADATIQTIMEKLQSYKSRVSLNFEGTQYQLGDFQVRVGKVAPSHSETMRGIVMEVQGSSHYCLSISAFLMLDVLLLVCSEL*

Click here to download the sequence:
Link to NCBI Protein BLAST