Transcript Information: R_Transcript_143451.p1


Annotated TAIR IDAT1G54200.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20235855-20236955 | Forward length=366
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1402943578011
Replicate 22.5398750503586
Replicate 31.7857402964742
Condition 2: 8 Hour
Replicate 12.3037776160043
Replicate 21.7431870252537
Replicate 32.2445540014457
Condition 3: 24 Hour
Replicate 12.7154395645671
Replicate 21.7193615801794
Replicate 32.3535166329997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143451.p1 GENE.R_Transcript_143451~~R_Transcript_143451.p1 ORF type:5prime_partial len:372 (-),score=5.24 R_Transcript_143451:264-1379(-)
GACGGTGATATTACTACTATCACTAACTCCACCCCTCCTCCTACTATTTCCACTCCTACCAGCAAAAACAACATTCATGATTATAGTACTACTACTAACTGTTACGCGAAACAGAGGAGGAGCAAAATGAGAAGCGATAGTACCTTAGAAACCGTCGATCTCCGTCGCGCTATCATGATCGATTCATGGATCGACAAACACCAGCATAAACCTCCTTCCCTTGATCATCATCATGATGATATTCACATCCTTCGTCAGAAATCCGTTCCGAGTAGCCGATCATCGTTGAGGCCGTCGGACCTCAGCTTCTCGGCGAAATTACGAGCGAACCTCGCACCACGCGCCGCCGAGAGCTGCTTCCGATTTGACCACGCGCCGCCTTCGAAGCGCGTTTCATCCTCAAGAATCTTCACCAAGACGAAATCTCGAGCGATGAAATTCTACGGCGAGCTCAAGAAGCCGAAACCTTCACCTCAGCAACAACCACAACCGGTCTCTCCTGGAGGCCGAATTGCGGCCTTTCTCAACTCCATTTTTCGAAACTCCAACGGAGCTCCGGCGAGTAGGTCTCACGTTCCGACGACGTCTACTTCGACTTCCACCTGCTCCTCAGCGTCGTCGTTTTCGCGATCGTGTCTCAGCAAAACGCCGTCGTCTCGAGGAAAATCAAGCACCAGTAGCACCGCCACCACCACCACGAAGCGTTCAGTGAGATTCTATCCAGTAAGCGTAATCGTCGACGAAGATTCTAGACCTTGCGGCCATAAATCCGTGCTGAAAGACGATCACTACGATTGCTCGAAGCCTCTGATTTCGAATCATGAGAACAATAACAATCAGAGGAAAATGAGGAGAGAGAAAGAGATCGATACGTTGATGATGATGATAAAGAGGAACTGCGAAGAGCGTAGAGTGACGAGATTCAATTGTGAAGAATCAGATGAAGAGATGAAAATAATAAATGAGAATGATGGAGGAGAAAGTTGTGCGAGTTCGGATTTGTTTGAGTTGGAGAATTTGAGTTCCATTGGTGTTGGTGTTGGTGTTGGTGTAAGTCGTTATAGTGAAGAGTTGCCGGTGTACGGTACCACCACTTTGGACAGCCTAACGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143451.p1 GENE.R_Transcript_143451~~R_Transcript_143451.p1 ORF type:5prime_partial len:372 (-),score=5.24 R_Transcript_143451:264-1379(-)
DGDITTITNSTPPPTISTPTSKNNIHDYSTTTNCYAKQRRSKMRSDSTLETVDLRRAIMIDSWIDKHQHKPPSLDHHHDDIHILRQKSVPSSRSSLRPSDLSFSAKLRANLAPRAAESCFRFDHAPPSKRVSSSRIFTKTKSRAMKFYGELKKPKPSPQQQPQPVSPGGRIAAFLNSIFRNSNGAPASRSHVPTTSTSTSTCSSASSFSRSCLSKTPSSRGKSSTSSTATTTTKRSVRFYPVSVIVDEDSRPCGHKSVLKDDHYDCSKPLISNHENNNNQRKMRREKEIDTLMMMIKRNCEERRVTRFNCEESDEEMKIINENDGGESCASSDLFELENLSSIGVGVGVGVSRYSEELPVYGTTTLDSLTA*

Click here to download the sequence:
Link to NCBI Protein BLAST