Transcript Information: R_Transcript_143566.p1


Annotated TAIR IDAT2G02750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:771641-773482 | Reverse length=613
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7531092442385
Replicate 21.067608495744
Replicate 30.64708298294216
Condition 2: 8 Hour
Replicate 10.55335288016373
Replicate 20.75799599461646
Replicate 32.1535809210629
Condition 3: 24 Hour
Replicate 11.6861666325432
Replicate 21.9936957189222
Replicate 31.360252833649


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143566.p1 GENE.R_Transcript_143566~~R_Transcript_143566.p1 ORF type:5prime_partial len:177 (+),score=52.13,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|0.0055,PPR|PF01535.16|0.044,PPR|PF01535.16|66,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|4.1e+03,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.015 R_Transcript_143566:1-531(+)
TGGAATGCAATGATTTCAGGGTATGGAAGAAATGGCGAGGAAGAAGCTGCATTTGAGATTTTCAATTTGATGCATAAAGACAATGTTCACCCTAATAGCACCACTTTTGTTAATGTGCTATCTGTCTGCAGTCACACTGGTAAACTGGACAAAGGATTGCAAGTATTTGAGATGATGAGCAGGGATTACGACCTGACTCCAACTCCTCAGCATTTTGCTTGTGTCATTGACCTGTTTGGCCGTGCTGGATACCTTGAGAAAGCTGAAGAATTCGTACATGGAATGCCAGAGACTTCAGCTTCTGTATTTTCTTCATTGCTTGGTGCTTCTGGACACCACCTGGATTCCCAACTTGGGGAAAACATGGCCGAAAAGCTTTCTGAGTTGGATCCTGAGAATTCAGCTTCCTTAGTTGTTTTGTCGAACATATATGCAGCGATGGGAAGATGGAAGGATGTGGAGAGGATAAGGAAAATGATTGATGTCAAGGGAGTGGAGAAAAATCCTGGTTATAGTGTAGAAATGACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143566.p1 GENE.R_Transcript_143566~~R_Transcript_143566.p1 ORF type:5prime_partial len:177 (+),score=52.13,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|0.0055,PPR|PF01535.16|0.044,PPR|PF01535.16|66,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|4.1e+03,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.015 R_Transcript_143566:1-531(+)
WNAMISGYGRNGEEEAAFEIFNLMHKDNVHPNSTTFVNVLSVCSHTGKLDKGLQVFEMMSRDYDLTPTPQHFACVIDLFGRAGYLEKAEEFVHGMPETSASVFSSLLGASGHHLDSQLGENMAEKLSELDPENSASLVVLSNIYAAMGRWKDVERIRKMIDVKGVEKNPGYSVEMT*

Click here to download the sequence:
Link to NCBI Protein BLAST