Transcript Information: R_Transcript_143605.p1


Annotated TAIR IDAT3G45780.1
Annotated Gene Namephototropin 1
Annotated Gene Symbol(s)PHOT1, NPH1, JK224, RPT1
Annotation TypeOrtholog
Chromosome Positionchr3:16818557-16823960 | Forward length=996
E-Value2E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9390364936298
Replicate 21.7291070931069
Replicate 32.1559282443438
Condition 2: 8 Hour
Replicate 12.7078485941659
Replicate 21.4731875095369
Replicate 31.452128849631
Condition 3: 24 Hour
Replicate 12.3227899077442
Replicate 21.0378945360272
Replicate 31.4935139668706


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143605.p1 GENE.R_Transcript_143605~~R_Transcript_143605.p1 ORF type:5prime_partial len:425 (+),score=78.84,Pkinase|PF00069.21|4.8e-64,Pkinase_Tyr|PF07714.13|1.3e+03,Pkinase_Tyr|PF07714.13|4.5e-26,Kinase-like|PF14531.2|2.4e-06 R_Transcript_143605:2-1276(+)
TTTATTGGGGTACAGTTAGATGGTAGTCAACATGTTGAAGCACTGCAAAACAGCATTTCATTTGCTTCTGCTACAGAGAGTGAGGAACAGGTGAAGCAAACGGCAAAAAATGTTGATGTTGCAGTTAGAGAACTTCCAGATGCCAATAAAAAACTAGAGGATTTGTGGGCTAACCATTCTAAGGTTGTACAACCAAAACCCCATAGAAAGGACAGTTCATCATGGAAAGCCATCCAGAAGATTACAGAAAGTGGAGAACAAATAGGTTTGAAACATTTTAAACCAGTGAAGCCTCTTGGGGCTGGTGACACAGGAAGTGTACATTTGGTAGAATTGTGTGGAACAGGAGAATTGTTTGCCATGAAGGCAATGGATAAGAACGCTATGCTAAACCGCAACAAGGTCCATAGAGCTTGTGCTGAAAGGGAAATCCTTGACATGCTTGACCACCCCTTTCTCCCTGCATTGTATGCTTCATTTCAGACAAAAACTCACATTTGCTTGATAACCGACTACTATCCTGGCGGGGAGCTCTTTCTACTTCTGGATAGACAACCGTTCAAGGTTTTGAAGGAAGACGCTGCTAGATTTTATGCAGCAGAGGTGATTGTTGCACTGGAATATCTACATTGCCAAGGTATAATATACAGGGATCTCAAGCCTGAGAATATATTACTCCAAAGCAACGGCCACATATCGCTGACAGATTTTGATCTATCATGTTTGACATCTTGCAAACCGCAGCTGCTGATTCCAGAGATCCGGGAAAAGAAAAGGCAACAGAAGGGTCAACGAACTCCTATATTTTTGGCTGAACCAATGCGAGCATCAAATTCTTTTGTAGGGACAGAGGAATACATAGCTCCGGAAATTGTCACTGGATCTGGCCACACGAGTGCAGTGGACTGGTGGGCTTTAGGAATTCTCTTGTTTGAGATGATCTATGGATACACACCATTCCGTGGTAAAACAAGGCAAAAAACATTCACCAACATTCTTCGTAAGGATGTTAAATTTCCAGCAAGTAAACAGGTGTCTCTCAGTGTGAAGCAGCTAATATACGAGTTGTTGCAGAAAGACCCCAAGACTAGATTGGGAGCTTGTGAAGGAGCTAATGAAATCAAGCGGCATCCATACTTTCGAGGAATCAATTGGGCTCTTATTCGTTGCATGAAGCCTCCCGAGCTTGATTTGCTGCCTTTCCCTTCCGACCCTGAAAAGGAAGCGAAGATCTTGGACCCTGATATGCTAGACCTGCAAACAAATGTGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143605.p1 GENE.R_Transcript_143605~~R_Transcript_143605.p1 ORF type:5prime_partial len:425 (+),score=78.84,Pkinase|PF00069.21|4.8e-64,Pkinase_Tyr|PF07714.13|1.3e+03,Pkinase_Tyr|PF07714.13|4.5e-26,Kinase-like|PF14531.2|2.4e-06 R_Transcript_143605:2-1276(+)
FIGVQLDGSQHVEALQNSISFASATESEEQVKQTAKNVDVAVRELPDANKKLEDLWANHSKVVQPKPHRKDSSSWKAIQKITESGEQIGLKHFKPVKPLGAGDTGSVHLVELCGTGELFAMKAMDKNAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYYPGGELFLLLDRQPFKVLKEDAARFYAAEVIVALEYLHCQGIIYRDLKPENILLQSNGHISLTDFDLSCLTSCKPQLLIPEIREKKRQQKGQRTPIFLAEPMRASNSFVGTEEYIAPEIVTGSGHTSAVDWWALGILLFEMIYGYTPFRGKTRQKTFTNILRKDVKFPASKQVSLSVKQLIYELLQKDPKTRLGACEGANEIKRHPYFRGINWALIRCMKPPELDLLPFPSDPEKEAKILDPDMLDLQTNVF*

Click here to download the sequence:
Link to NCBI Protein BLAST