Transcript Information: R_Transcript_143606.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value5.8E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94192406600362
Replicate 20.73208857797413
Replicate 30.51116848192251
Condition 2: 8 Hour
Replicate 11.1269644954799
Replicate 20.90441502565465
Replicate 31.0885903161459
Condition 3: 24 Hour
Replicate 10.76846216661771
Replicate 20.55368850771324
Replicate 31.0379106825028


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143606.p1 GENE.R_Transcript_143606~~R_Transcript_143606.p1 ORF type:5prime_partial len:717 (+),score=118.73,ABC_tran|PF00005.23|2e-24,ABC2_membrane_3|PF12698.3|2.1e-17,AAA_21|PF13304.2|2.5e-11 R_Transcript_143606:2-2152(+)
ATTTTTCTGCTTAATTTTTCAGATCCAAATCTTGGGTGGACTGTGGCCTTGCAGGGGTTCCCAGACTCTCCACCATCAAGCAACAAAACATTGCCCTCCGGCGAGTTTGAGCTTCTTGCATCACTGTTCTTGTTCATGGTTTCTATGTTCACCTTTGTGTTTCAAATAAGCTCTATTGCCCTGGAGAAGGAACTCAAACTTAGGCAGGCAATGAATATAATGGGGCTATACGATTCTGCCTACTGGCTTTCATGGTTTGTGTGGGAGAGCTTCATGATTCTTATCTCATCACTCTGTATATTAGTTGCTGGGATGATTTTTCGGTTTGATTTTTTCTTACAAAACAGTTCTGCAGTCGTGTTTCTCATTTTCTTTCTTTTCCAGTTGAATATGATGGGTTTTGCCTTCATGCTTTCTGCTTTTATTGGAAAATCATCTTCTGCATTCAAAGCAGGATTCTGGATATTTTTGATTGGCGCTATACTACAGTTTGTCGAGCAATTCGTGCTTCCCTCAAAGAAAGCTCGTCTCTTGTATTACCTCCCACCAACTCTACTAGCCTATGCAATCGATGTGCTCCTGACTGCAACAGATCCTAATGAACCAGGAATTCGATGGAGCCAACGCGCAAAGTGTACTGGTGACTTCCAAAGCTGTGCCTTGACACTAAATGATGTTTACATTCGGCTCATCCAAACTTTTATATGCTGGGTTCTTTTGGCTTTGTACTTTGATAATGTACTACCTAGCCCCAATGGTAAGAGGAAGTCGCTACTTTACTTTTTGAATCCGGGTTACTGGATAGGAAGAGGTGGAAACAAGGCTCGAGGTGGTATATGTTCCAGCTATAACTCATCTCCTGTCCCTGAAATGGTTACTCCTAATGATGTCGATGTTCTTGAAGAAGAAAATACCGTGAAGCAGCAAATGAAGTTTGGTGAAATTGATCCGAATTCTGCTGTTCAGATACAAGGTCTTGTGATGATTTATCCAGGAAAACTCAACATAGGTTGCTGCTGTAAATGCAGCAAGAGTGAACCCTTTCATGCCATCAAGGGTTTGTACTTAAATTTGGCTATGGATCAACTATTTTGTCTCCTGGGACCGAATGGAGCTGGAAAGACTACGACAATAAACTGCTTGACAGGCATAACATCAGCCACAGAAGGAGATGCACTAATATATGGAAATTCCATTAGAAGTTCCATTGGAATGTCAAATATCCGAAAAGTTATAGGTGTTTGTCCTCAGTTTGATATTCTGTGGAATGTATTGACTGGTGAAGAACACCTTGAGCTATTTGCTAGCATAAAAGGCATGCGGCCTTCATCCATCAAACATGTTGTTAAGAAATCGCTGGAAGAAGTGAGGCTCACAGATTCAGCTAAAGTGAGAGCTGGTAGTTACAGTGGGGGAATGAGACGTCGCCTTAGTGTTGCATCTGCCCTCCTTGGTGACCCAAGACTAGTCATTTTGGATGAACCGACGACTGGTATGGATCCAATAAGCAGGAGGTATGTGTGGGACATAATAGAGAATGCAAAGAGAGGGCGAGTGATTGTTCTAACAACACATTCAATGGAAGAAGCTGATGTGTTAGGGGATCGTATAGGAATCATGGCTAAAGGGAGGCTCCGGTGCATAGGGACTTCGATCAGATTGAAGTCTCGGTTTGGGACTGGTTTTATCGCTAATTTAACCTTTGCTAGTGGTGATTCATCTGCAAATTCTGCATTTAAGCAGGCAGTAAAGAGGTTTTTTAAGCAACATCTGGGAGTCTCACCAAAGGAGGAAAACAATGATTTTCTGACATTTGTGATTCCTCGCGAAAAAGAAGGCCTCCTGAAGAGAACCCTTGGGGAGCTTCAAGATAAACAAAGAGAGTTCGGTATATCAGACATGCAACTTGGATTGACAACTCTGGAAGAAGTTTTCCTGAATATTGCAAGACAGGCAGAACTGGAATGTGCTGCAGATGAAGGGAGATTGGTGACTCTTACACTAAATACATCTGGGACCTTAGTTCAGATGTTTTTCTGTGTTTTGCTGTGTGGAGATGAAGGCCTTGCTTGGGTATTTATACAACAATTGGGAGTAGGTGAAGCTTCAATTTTTCAGCAATGGGGGGCTGCCAATTTTCAACTATGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143606.p1 GENE.R_Transcript_143606~~R_Transcript_143606.p1 ORF type:5prime_partial len:717 (+),score=118.73,ABC_tran|PF00005.23|2e-24,ABC2_membrane_3|PF12698.3|2.1e-17,AAA_21|PF13304.2|2.5e-11 R_Transcript_143606:2-2152(+)
IFLLNFSDPNLGWTVALQGFPDSPPSSNKTLPSGEFELLASLFLFMVSMFTFVFQISSIALEKELKLRQAMNIMGLYDSAYWLSWFVWESFMILISSLCILVAGMIFRFDFFLQNSSAVVFLIFFLFQLNMMGFAFMLSAFIGKSSSAFKAGFWIFLIGAILQFVEQFVLPSKKARLLYYLPPTLLAYAIDVLLTATDPNEPGIRWSQRAKCTGDFQSCALTLNDVYIRLIQTFICWVLLALYFDNVLPSPNGKRKSLLYFLNPGYWIGRGGNKARGGICSSYNSSPVPEMVTPNDVDVLEEENTVKQQMKFGEIDPNSAVQIQGLVMIYPGKLNIGCCCKCSKSEPFHAIKGLYLNLAMDQLFCLLGPNGAGKTTTINCLTGITSATEGDALIYGNSIRSSIGMSNIRKVIGVCPQFDILWNVLTGEEHLELFASIKGMRPSSIKHVVKKSLEEVRLTDSAKVRAGSYSGGMRRRLSVASALLGDPRLVILDEPTTGMDPISRRYVWDIIENAKRGRVIVLTTHSMEEADVLGDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANLTFASGDSSANSAFKQAVKRFFKQHLGVSPKEENNDFLTFVIPREKEGLLKRTLGELQDKQREFGISDMQLGLTTLEEVFLNIARQAELECAADEGRLVTLTLNTSGTLVQMFFCVLLCGDEGLAWVFIQQLGVGEASIFQQWGAANFQLW*

Click here to download the sequence:
Link to NCBI Protein BLAST