Transcript Information: R_Transcript_143666.p2


Annotated TAIR IDAT1G53250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19857468-19859156 | Forward length=371
E-Value5.8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53371230861751
Replicate 20.12278538255145
Replicate 30
Condition 2: 8 Hour
Replicate 10.57276877069579
Replicate 20.13076539088413
Replicate 30.21229953941973
Condition 3: 24 Hour
Replicate 10.53702473047261
Replicate 20.12897812216712
Replicate 30.89598791115954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143666.p2 GENE.R_Transcript_143666~~R_Transcript_143666.p2 ORF type:complete len:171 (+),score=33.49,NUMOD3|PF07460.7|6.5e-06 R_Transcript_143666:195-707(+)
ATGTCATTGCCCCATTTGACATTTTTTGTTCAACCCCGGATTACTCATCGGGATTCTTGTGTCCGACTGTGGCCACTTTGTACTATGATTGACCATTCAGATCAAGAACATCGAGAATTAGCTGTGAGATTCTATTGTTGCAACACCCCGATGAAGTATTTACCTAGACCATCTGGTACCCCCAGCTCCAGCATCAGGGTGCATCCTGTAGAAGCAGTTACTCTTGCTACAAAGGAAAGGGAGTCCCTTGATATGAGTTCTGAGCCAATTTCTAGACTAAATTCACGTTACGATGATGCATCAGTTGCTGTTGATGGACTAGCATGGCAGCATTCTGAGCCTGTGTTGACGAAGAGCATGGAGGAAGACAAGGAAACTCTAAGGAGGAGGAGAATAGGTTTGGCAAACAAGGGAAAAGTGCCTTGGAACAAAGGCAAGAAGCATACCGCAGAGACTCGTGCACGGATCAAGGAGGGAACCCTACAAGCCTTGAGAGATCCCAAGGTGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143666.p2 GENE.R_Transcript_143666~~R_Transcript_143666.p2 ORF type:complete len:171 (+),score=33.49,NUMOD3|PF07460.7|6.5e-06 R_Transcript_143666:195-707(+)
MSLPHLTFFVQPRITHRDSCVRLWPLCTMIDHSDQEHRELAVRFYCCNTPMKYLPRPSGTPSSSIRVHPVEAVTLATKERESLDMSSEPISRLNSRYDDASVAVDGLAWQHSEPVLTKSMEEDKETLRRRRIGLANKGKVPWNKGKKHTAETRARIKEGTLQALRDPKVK*

Click here to download the sequence:
Link to NCBI Protein BLAST