Transcript Information: R_Transcript_143677.p1


Annotated TAIR IDAT5G40650.1
Annotated Gene Namesuccinate dehydrogenase 2-2
Annotated Gene Symbol(s)SDH2-2
Annotation TypeOrtholog
Chromosome Positionchr5:16281462-16283296 | Forward length=280
E-Value4.2E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1120.79768541943
Replicate 2134.62796371799
Replicate 3127.40264168647
Condition 2: 8 Hour
Replicate 1119.03615244017
Replicate 2134.75153139501
Replicate 3163.50046270423
Condition 3: 24 Hour
Replicate 1171.10875049862
Replicate 2170.65979351286
Replicate 3160.67378721468


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143677.p1 GENE.R_Transcript_143677~~R_Transcript_143677.p1 ORF type:complete len:267 (+),score=26.60,Fer2_3|PF13085.2|2e-31,Fer4_17|PF13534.2|1.6e+04,Fer4_17|PF13534.2|4.3e-09,Fer4_8|PF13183.2|0.02,Fer4_8|PF13183.2|0.00087,Fer4_18|PF13746.2|3.6e+03,Fer4_18|PF13746.2|0.92,Fer4_18|PF13746.2|9.5e-06 R_Transcript_143677:222-1022(+)
ATGGCTACCGGCCTCCTTCGCCGTTCAGCTTCAAAGCTCCGGACCCACCTGAACTACCACAACGTGAGACCCCATGCGACGGTCGCAGACTCTTCATCCTTGATGAAGACCTTCTCGATCTACCGATGGAACCCAGACAACCCATCAAAGCCAGAGCTCCAAAACTACGAGATCAACCTGAAGGAATGTGGGCCCATGGTCCTTGACGCCCTCATCAAGATCAAGAACGAAATCGACCCGACCCTGACCTTCCGTCGTTCCTGCCGTGAGGGGATTTGCGGGTCATGTGCGATGAACATCGATGGGTGTAATGGGTTAGCTTGTCTGACCAAGATCCCTTCTGGTGGGCCCAGCACAGTCACCCCTTTGCCCCACATGTTCGTTGTTAAAGATCTGGTGGTTGATATGACCAATTTCTACGACCAGTATAAGAGCATTGAGCCTTGGTTGAAGAGAAAGAACCCGGCTCCTGAGCCTGGGAAAGAGTACCCTCAAAGTAAGGAAGATAGGAAGAAACTTGATGGCATGTATGAGTGTATTCTTTGTGCTTGTTGTAGCACTTCTTGCCCCAGCTACTGGTGGAATCCTGAGTCTTATTTGGGACCCGCCGCTCTTCTCCACGCTCACCGATGGATTGCTGACAGTCGTGATGAGTATACCAAGGAGCGGCTTGAGGCTATAAATGATGAATTTAAGCTCTACAGGTGCCACACAATTATGAACTGTACTCGTGCCTGTCCAAAGGGTTTGAACCCTGCAAAGCAGATCCAGAGCATCAAGCGTCTTGAGCTAAGGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143677.p1 GENE.R_Transcript_143677~~R_Transcript_143677.p1 ORF type:complete len:267 (+),score=26.60,Fer2_3|PF13085.2|2e-31,Fer4_17|PF13534.2|1.6e+04,Fer4_17|PF13534.2|4.3e-09,Fer4_8|PF13183.2|0.02,Fer4_8|PF13183.2|0.00087,Fer4_18|PF13746.2|3.6e+03,Fer4_18|PF13746.2|0.92,Fer4_18|PF13746.2|9.5e-06 R_Transcript_143677:222-1022(+)
MATGLLRRSASKLRTHLNYHNVRPHATVADSSSLMKTFSIYRWNPDNPSKPELQNYEINLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGGPSTVTPLPHMFVVKDLVVDMTNFYDQYKSIEPWLKRKNPAPEPGKEYPQSKEDRKKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAHRWIADSRDEYTKERLEAINDEFKLYRCHTIMNCTRACPKGLNPAKQIQSIKRLELRS*

Click here to download the sequence:
Link to NCBI Protein BLAST