Transcript Information: R_Transcript_143796.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value7.6E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.876764404524
Replicate 24.1704980278948
Replicate 36.1189230565065
Condition 2: 8 Hour
Replicate 11.6771140374825
Replicate 25.360485372887
Replicate 34.8487179054458
Condition 3: 24 Hour
Replicate 18.1767532591823
Replicate 23.3233951752925
Replicate 39.7445260592351


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143796.p1 GENE.R_Transcript_143796~~R_Transcript_143796.p1 ORF type:5prime_partial len:146 (-),score=31.07,Pectate_lyase_3|PF12708.3|2.6e-09 R_Transcript_143796:1386-1823(-)
AGGAAAACAAGGGTGTTAGAAGAGTATACTTCTACATCATTTGAGTACCCTGCCTTAAACTGCAGGGCTCACAGTGCATCTTTGGCTGAGTTTGGAGGAGTTGGTGATGGGAAAACTCTGAACACCAAGGCATTTCAGGATGCAATTAATCACTTAAGCCAATATGAAAATGATGGAGGTGGTCAGCTTTTTGTTCCTCCAGGAAAATGGTTAACTGGAAGCTTCAATCTCACCAGCCACTTCACTCTTTACCTTCATAGGGATGCTGTTCTCCTTGCTTCTCAGGTCTCTCTTTTACTCAATGTTTCCCTCTTCTTTTTTGGGTCTTGTTCTGCTTTATGTCCAATTTTAGTGGAGTTGAAAGCTACTGTTGACAGGTTTACAAATTTGGATTTTAATGGACTAAATCAAAGTAACTCTTTGATTATTCACGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143796.p1 GENE.R_Transcript_143796~~R_Transcript_143796.p1 ORF type:5prime_partial len:146 (-),score=31.07,Pectate_lyase_3|PF12708.3|2.6e-09 R_Transcript_143796:1386-1823(-)
RKTRVLEEYTSTSFEYPALNCRAHSASLAEFGGVGDGKTLNTKAFQDAINHLSQYENDGGGQLFVPPGKWLTGSFNLTSHFTLYLHRDAVLLASQVSLLLNVSLFFFGSCSALCPILVELKATVDRFTNLDFNGLNQSNSLIIHV*

Click here to download the sequence:
Link to NCBI Protein BLAST